RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 CRIP3Q6Q6R5 217 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 ZDHHC24Q6UX98 284 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 CENPQQ7L2Z9 268 aaPredicted RBP5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 MIER3Q7Z3K6 550 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 ZNF410Q86VK4 478 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 ARHGEF19Q8IW93 802 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 VPS52Q8N1B4 723 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 Q8N1X5 172 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 TDRD5Q8NAT2 981 aaKnown RBP5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 KCNG4Q8TDN1 519 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 SNX19Q92543 992 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 PHKBQ93100 1093 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 JAKMIP1Q96N16 626 aaKnown RBP5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 JPH2Q9BR39 696 aaPredicted RBP5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 SLC26A6Q9BXS9 759 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 UNC45AQ9H3U1 944 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 SERHL2Q9H4I8 314 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 POMKQ9H5K3 350 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 PPCSQ9HAB8 311 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 PTPRHQ9HD43 1115 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 SH3GLB2Q9NR46 395 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 TMEM74BQ9NUR3 256 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 VPS54Q9P1Q0 977 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 STK39Q9UEW8 545 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 PIN4Q9Y237 131 aaKnown RBP5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 MRPS17Q9Y2R5 130 aaKnown RBP5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 HS3ST3A1Q9Y663 406 aa5.56□□□□□ -1.52
AMBRA1-209ENST00000529963 ZNF292O60281 2723 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 A0A087WZ62 844 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 ADAMTS3O15072 1205 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 TCEA3O75764 348 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 PEX11BO96011 259 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 THP07101 528 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 CTSAP10619 480 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 C6P13671 934 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 CPA1P15085 419 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 IFNAR1P17181 557 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 ITGALP20701 1170 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 PSMA5P28066 241 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 RAB32Q13637 225 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 IQCB1Q15051 598 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 Q4G0T1 1027 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 INO80DQ53TQ3 878 aaPredicted RBP5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 LY6G5CQ5SRR4 150 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 RBM20Q5T481 1227 aaKnown RBP5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 KLHDC7AQ5VTJ3 777 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 CATSPER4Q7RTX7 472 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 COLGALT2Q8IYK4 626 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 FAM186BQ8IYM0 893 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 KRT78Q8N1N4 520 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 FBXL16Q8N461 479 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 URGCPQ8TCY9 931 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 TBCKQ8TEA7 893 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 IGSF21Q96ID5 467 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 ZNF518BQ9C0D4 1074 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 ZBP1Q9H171 429 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 MFSD1Q9H3U5 465 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 PLCB1Q9NQ66 1216 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 FNIP2Q9P278 1114 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 SUCLA2Q9P2R7 463 aaPredicted RBP5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 USP24Q9UPU5 2620 aa5.55□□□□□ -1.52
AMBRA1-209ENST00000529963 IGKV6-21A0A0C4DH24 114 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 PYCARD-AS1I3L0S3 204 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 CPLX1O14810 134 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 DKC1O60832 514 aaKnown RBP eCLIP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 CSDE1O75534 798 aaKnown RBP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 PSMD10O75832 226 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 PDGFBP01127 241 aaPredicted RBP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 GALTP07902 379 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 PDHA1P08559 390 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 WEE2P0C1S8 567 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 PPP3CBP16298 524 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 EPCAMP16422 314 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 RPS6KB1P23443 525 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 HSPA4P34932 840 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 PSMC5P62195 406 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 DRP2Q13474 957 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 PTPAQ15257 358 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 ZIK1Q3SY52 487 aaPredicted RBP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 GALNT17Q6IS24 598 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 ERAP2Q6P179 960 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 CPLX2Q6PUV4 134 aaKnown RBP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 MOXD1Q6UVY6 613 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 LAYNQ6UX15 382 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 MICALCLQ6ZW33 695 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 ZNF627Q7L945 461 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 SRLQ86TD4 932 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 SKAP1Q86WV1 359 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 RHPN2Q8IUC4 686 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 C12orf76Q8N812 135 aaPredicted RBP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 NEU4Q8WWR8 484 aaPredicted RBP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 LARP4BQ92615 738 aaKnown RBP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 NMD3Q96D46 503 aaKnown RBP5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 Q96MF0 132 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 NLRP4Q96MN2 994 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 HEPHQ9BQS7 1158 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 AGXT2Q9BYV1 514 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 SFXN1Q9H9B4 322 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 CASS4Q9NQ75 786 aa5.54□□□□□ -1.52
AMBRA1-209ENST00000529963 TBC1D13Q9NVG8 400 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms