RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DYTNA2CJ06 578 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 PER2O15055 1255 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 INSIG1O15503 277 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 TGFB1I1O43294 461 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 CLEC3BP05452 202 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 COX7A2P14406 83 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 ITGB6P18564 788 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 TNFRSF1BP20333 461 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 NAP1L1P55209 391 aaKnown RBP4.9□□□□□ -1.63
C11orf88-204ENST00000529661 SETQ01105 290 aaPredicted RBP4.9□□□□□ -1.63
C11orf88-204ENST00000529661 RHAGQ02094 409 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 KCTD2Q14681 263 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 C6orf10Q5SRN2 563 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 SNX30Q5VWJ9 437 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 FAM205BPQ63HN1 556 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 C17orf99Q6UX52 265 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 CYB5R4Q7L1T6 521 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 TMEM199Q8N511 208 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 METTL6Q8TCB7 284 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 KCNG4Q8TDN1 519 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 CREB3L4Q8TEY5 395 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 NOC3LQ8WTT2 800 aaKnown RBP4.9□□□□□ -1.63
C11orf88-204ENST00000529661 MPHOSPH8Q99549 860 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 CADM1Q9BY67 442 aaKnown RBP4.9□□□□□ -1.63
C11orf88-204ENST00000529661 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.9□□□□□ -1.63
C11orf88-204ENST00000529661 Q9N2J8 555 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 NRBP1Q9UHY1 535 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 SARDHQ9UL12 918 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 PCDHA12Q9UN75 941 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 LAMP3Q9UQV4 416 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 CLDN16Q9Y5I7 305 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 PIAS3Q9Y6X2 628 aa4.9□□□□□ -1.63
C11orf88-204ENST00000529661 C17orf113A0A1B0GUU1 675 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 FSD2A1L4K1 749 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 CXorf65A6NEN9 183 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 A6NNC1 897 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 PTP4A3O75365 173 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 HSP90AA1P07900 732 aaKnown RBP4.89□□□□□ -1.63
C11orf88-204ENST00000529661 FCGR2AP12318 317 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 LAMP2P13473 410 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 MAPK4P31152 587 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 ARL1P40616 181 aaPredicted RBP4.89□□□□□ -1.63
C11orf88-204ENST00000529661 RGS2P41220 211 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 FOXG1P55316 489 aaPredicted RBP4.89□□□□□ -1.63
C11orf88-204ENST00000529661 PPATQ06203 517 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 EIF4A2Q14240 407 aaKnown RBP4.89□□□□□ -1.63
C11orf88-204ENST00000529661 TBCEQ15813 527 aaPredicted RBP4.89□□□□□ -1.63
C11orf88-204ENST00000529661 FBXO43Q4G163 708 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 SLC9B1Q4ZJI4 515 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 ARL13AQ5H913 290 aaPredicted RBP4.89□□□□□ -1.63
C11orf88-204ENST00000529661 KIAA1755Q5JYT7 1200 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 C10orf76Q5T2E6 689 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 DAB2IPQ5VWQ8 1189 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 NUGGCQ68CJ6 796 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 ISM2Q6H9L7 571 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 C16orf54Q6UWD8 224 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 CPLX4Q7Z7G2 160 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 KLBQ86Z14 1044 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 ADSSL1Q8N142 457 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 PLD5Q8N7P1 536 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 CCDC89Q8N998 374 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 IP6K1Q92551 441 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 MSI2Q96DH6 328 aaKnown RBP4.89□□□□□ -1.63
C11orf88-204ENST00000529661 RSRC1Q96IZ7 334 aaKnown RBP4.89□□□□□ -1.63
C11orf88-204ENST00000529661 SLC25A18Q9H1K4 315 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 UPB1Q9UBR1 384 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 FBXO4Q9UKT5 387 aa4.89□□□□□ -1.63
C11orf88-204ENST00000529661 TCRBV7S3A2A0A539 114 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 TMEM247A6NEH6 219 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 NPIPB15A6NHN6 443 aaPredicted RBP4.88□□□□□ -1.63
C11orf88-204ENST00000529661 MSI1O43347 362 aaKnown RBP4.88□□□□□ -1.63
C11orf88-204ENST00000529661 OAZ2O95190 189 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 EPN2O95208 641 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 TOMM40O96008 361 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 WNT1P04628 370 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 CHRNB1P11230 501 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 STAT1P42224 750 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 DRG2P55039 364 aaKnown RBP4.88□□□□□ -1.63
C11orf88-204ENST00000529661 EFNB1P98172 346 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 MAMLD1Q13495 774 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 DCTN2Q13561 401 aaKnown RBP4.88□□□□□ -1.63
C11orf88-204ENST00000529661 GALNT3Q14435 633 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 PTGR1Q14914 329 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 MEA1Q16626 185 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 PIK3CD-AS1Q5SR53 167 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 HMBOX1Q6NT76 420 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 TRAPPC11Q7Z392 1133 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 SAMD14Q8IZD0 417 aaPredicted RBP4.88□□□□□ -1.63
C11orf88-204ENST00000529661 CPXM2Q8N436 756 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 SCAIQ8N9R8 606 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 ETNPPLQ8TBG4 499 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 HSPH1Q92598 858 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 KAT2AQ92830 837 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 GHITMQ9H3K2 345 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 BRF2Q9HAW0 419 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 PCDHB16Q9NRJ7 776 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 KRT84Q9NSB2 600 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 DIAPH3Q9NSV4 1193 aa4.88□□□□□ -1.63
C11orf88-204ENST00000529661 MPP6Q9NZW5 540 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms