RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	ITGA9	Q13797	1035 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	GRM3	Q14832	879 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	DDR2	Q16832	855 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	TRMT5	Q32P41	509 aa	Known RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	TSTD2	Q5T7W7	516 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	FAM171A1	Q5VUB5	890 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	TLDC1	Q6P9B6	456 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	KLHDC10	Q6PID8	442 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	ARHGAP36	Q6ZRI8	547 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	RINL	Q6ZS11	566 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	RAPH1	Q70E73	1250 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	CMC1	Q7Z7K0	106 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	TMEM151A	Q8N4L1	468 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	USP33	Q8TEY7	942 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	FAR2	Q96K12	515 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	CASD1	Q96PB1	797 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	MRPL57	Q9BQC6	102 aa	Known RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	APOL2	Q9BQE5	337 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	CCDC28B	Q9BUN5	200 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	ACE2	Q9BYF1	805 aa	Predicted RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	GMIP	Q9P107	970 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	SLC17A6	Q9P2U8	582 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	FBXO5	Q9UKT4	447 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	SLC39A10	Q9ULF5	831 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	LRFN2	Q9ULH4	789 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	RUVBL2	Q9Y230	463 aa	Known RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	PTPRD	P23468	1912 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	CARNS1	A5YM72	827 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	MROH6	A6NGR9	719 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999		A8MUI8	341 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	HDAC3	O15379	428 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	B4GALT3	O60512	393 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	RAMP2	O60895	175 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	CIB2	O75838	187 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	VAPB	O95292	243 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	MT-CYB	P00156	380 aa	Predicted RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	RBP1	P09455	135 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	OR4Q2	P0C623	313 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	SLC35E2B	P0CK96	405 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	KIT	P10721	976 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	HLA-DPA1	P20036	260 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	GABRB3	P28472	473 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	PGF	P49763	221 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	RPL14	P50914	215 aa	Known RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	SLC12A2	P55011	1212 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	GALNT1	Q10472	559 aa	Predicted RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	EFEMP1	Q12805	493 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	MSLN	Q13421	630 aa	Predicted RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	OLIG2	Q13516	323 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	SERINC3	Q13530	473 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	RCN2	Q14257	317 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	RFTN1	Q14699	578 aa	Predicted RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	POLD3	Q15054	466 aa	Predicted RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	E2F5	Q15329	346 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	CFAP157	Q5JU67	520 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	SH2D4B	Q5SQS7	431 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	ESRP1	Q6NXG1	681 aa	Known RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	ZCCHC23	Q6ZST2	131 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	SETD3	Q86TU7	594 aa	Predicted RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	TREML1	Q86YW5	311 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	SCUBE1	Q8IWY4	988 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	PLD6	Q8N2A8	252 aa	Known RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	BBS5	Q8N3I7	341 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	FEM1C	Q96JP0	617 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	CNDP1	Q96KN2	507 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	ZNF778	Q96MU6	729 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	GATA5	Q9BWX5	397 aa	Predicted RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	MAGEH1	Q9H213	219 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	MRPL46	Q9H2W6	279 aa	Known RBP	10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	TASP1	Q9H6P5	420 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	SP110	Q9HB58	689 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	GPAM	Q9HCL2	828 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	PNPO	Q9NVS9	261 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	UBP1	Q9NZI7	540 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	MPP6	Q9NZW5	540 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	ZNF212	Q9UDV6	495 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	PLA2G4C	Q9UP65	541 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	L3MBTL1	Q9Y468	752 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	BACE2	Q9Y5Z0	518 aa		10.82	□□□□□ -0.68
PUF60-213	ENST00000528999	PLXNA3	P51805	1871 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	THSD7B	Q9C0I4	1608 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	FAM95C	A0A1B0GW59	222 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	MTMR11	A4FU01	709 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999		F8W810	466 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	MATN2	O00339	956 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	PRAMEF11	O60813	436 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	FKBP6	O75344	327 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	PMPCB	O75439	489 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	LUC7L3	O95232	432 aa	Known RBP	10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	MOCS2	O96007	188 aa	Predicted RBP	10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	ENO1	P06733	434 aa	Known RBP	10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	MAP2K2	P36507	400 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	PPP3CC	P48454	512 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	ALDH18A1	P54886	795 aa	Known RBP	10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	ACVR1	Q04771	509 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	TAF10	Q12962	218 aa		10.81	□□□□□ -0.68
PUF60-213	ENST00000528999	POU6F1	Q14863	301 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms