RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 HECAQ9UBI9 543 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 RSPH14Q9UHP6 348 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 INTS6Q9UL03 887 aaKnown RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 UTP11Q9Y3A2 253 aaKnown RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 TTLL3Q9Y4R7 772 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 MRFAP1Q9Y605 127 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 COL4A3Q01955 1670 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 WASH3PC4AMC7 463 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 INSIG1O15503 277 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 LAMTOR5O43504 91 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 IFNB1P01574 187 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 JCHAINP01591 159 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 PECAM1P16284 738 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 MCM3P25205 808 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 TARSP26639 723 aaKnown RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 CNR2P34972 360 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 NUDT1P36639 197 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 COILP38432 576 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 DPP6P42658 865 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 SCNN1BP51168 640 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 IRAK1P51617 712 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 SEC13P55735 322 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 DR1Q01658 176 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 CAV1Q03135 178 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 ELP6Q0PNE2 266 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 SLC10A2Q12908 348 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 CALCOCO2Q13137 446 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 OASLQ15646 514 aaKnown RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 CRY1Q16526 586 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 PTPRNQ16849 979 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 MYLK3Q32MK0 819 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 ARMC12Q5T9G4 340 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 ERAP2Q6P179 960 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 USP30Q70CQ3 517 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 SRLQ86TD4 932 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 CNPY4Q8N129 248 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 C17orf53Q8N3J3 647 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 ALLCQ8N6M5 410 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 IL17RCQ8NAC3 791 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 TXNDC5Q8NBS9 432 aaKnown RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 SPATA4Q8NEY3 305 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 ST13P5Q8NFI4 369 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 GABPB2Q8TAK5 448 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 RUBCNQ92622 972 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 RPL10LQ96L21 214 aaKnown RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 FCRL5Q96RD9 977 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 LGMNQ99538 433 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 PCED1AQ9H1Q7 454 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 RSPH9Q9H1X1 276 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 GBA3Q9H227 469 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 LRRC40Q9H9A6 602 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 PCDH9Q9HC56 1237 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 RAD18Q9NS91 495 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 HACD3Q9P035 362 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 BCCIPQ9P287 314 aaKnown RBP eCLIP8.04□□□□□ -1.12
SSBP3-211ENST00000528787 DKK3Q9UBP4 350 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 FAM153AQ9UHL3 310 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 FBXO4Q9UKT5 387 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 FZD4Q9ULV1 537 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 CLEC4EQ9ULY5 219 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 ATP8A1Q9Y2Q0 1164 aa8.04□□□□□ -1.12
SSBP3-211ENST00000528787 ANKRD36A6QL64 1941 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 PRR33A8MZF0 331 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 J3KR12 359 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 KCNK1O00180 336 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SNAP91O60641 907 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 GPR37L1O60883 481 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SLC34A2O95436 690 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 C7P10643 843 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 CYP2A6P11509 494 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ITGB7P26010 798 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 PTPN3P26045 913 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 RBL1P28749 1068 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 IL12RB1P42701 662 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 GRIA4P48058 902 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 CCNHP51946 323 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 EPHB1P54762 984 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SLC10A7Q0GE19 358 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ZNF528Q3MIS6 628 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ZNF805Q5CZA5 627 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ANKRD20A2Q5SQ80 823 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ANKRD20A1Q5TYW2 823 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ANKRD20A3Q5VUR7 823 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ZDHHC20Q5W0Z9 365 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 EGFLAMQ63HQ2 1017 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 TMEM215Q68D42 235 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 C8orf74Q6P047 294 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 NEK5Q6P3R8 708 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ZC3H14Q6PJT7 736 aaKnown RBP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 NPNTQ6UXI9 565 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 LINGO4Q6UY18 593 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SLC36A4Q6YBV0 504 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 ADAT2Q7Z6V5 191 aaKnown RBP8.03□□□□□ -1.12
SSBP3-211ENST00000528787 PGBD3Q8N328 593 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 FAM71DQ8N9W8 422 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 CYB5D2Q8WUJ1 264 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 C1orf54Q8WWF1 131 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SPOCK2Q92563 424 aa8.03□□□□□ -1.12
SSBP3-211ENST00000528787 SIPA1Q96FS4 1042 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms