RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 GRIA2P42262 883 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 SLC1A2P43004 574 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 CHRNA4P43681 627 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 ARCN1P48444 511 aaKnown RBP19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 COG7P83436 770 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 XIAPP98170 497 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 MS4A2Q01362 244 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 FOLH1Q04609 750 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 FLOT2Q14254 428 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 PDK3Q15120 406 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 ZNF423Q2M1K9 1284 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 OGFRL1Q5TC84 451 aaPredicted RBP19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 ANKRD23Q86SG2 305 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 CPSF7Q8N684 471 aaKnown RBP19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 SCAMP5Q8TAC9 235 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 TSGA13Q96PP4 275 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 RTP3Q9BQQ7 232 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 TRIM4Q9C037 500 aa19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 SUDS3Q9H7L9 328 aaPredicted RBP19.09■□□□□ 0.65
TM9SF1-206ENST00000528669 NEMP2A6NFY4 417 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 AURKAO14965 403 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 CACNG3O60359 315 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 ZNF865P0CJ78 1059 aaPredicted RBP19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 TAS2R39P59534 338 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 ROR2Q01974 943 aaKnown RBP19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 CEACAM7Q14002 265 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 CCL14Q16627 93 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 LIN52Q52LA3 116 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 PIGGQ5H8A4 983 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 PAXIP1Q6ZW49 1069 aaPredicted RBP19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 PNPLA1Q8N8W4 532 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 PPHLN1Q8NEY8 458 aaKnown RBP19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 HASPINQ8TF76 798 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 NPAS2Q99743 824 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 PTPN18Q99952 460 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 SLC39A8Q9C0K1 460 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 GLOD4Q9HC38 313 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 TMLHEQ9NVH6 421 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 ST3GAL5Q9UNP4 418 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 COPG1Q9Y678 874 aaKnown RBP19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 AP3B1O00203 1094 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 PSMD3O43242 534 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 CTSHP09668 335 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 ARSAP15289 507 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 CCNCP24863 283 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 SEPT6Q14141 434 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 UGP2Q16851 508 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 FAM110CQ1W6H9 321 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 CNPY1Q3B7I2 92 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 NOMO2Q5JPE7 1267 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 SH2D4BQ5SQS7 431 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 DCUN1D1Q96GG9 259 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 FCRL5Q96RD9 977 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 SH3GL3Q99963 347 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 WDR41Q9HAD4 459 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 VTI1BQ9UEU0 232 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 CPA4Q9UI42 421 aa19.08■□□□□ 0.64
TM9SF1-206ENST00000528669 ARL5CA6NH57 179 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 MSI1O43347 362 aaKnown RBP19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 HNRNPLP14866 589 aaKnown RBP eCLIP19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 PRKAA2P54646 552 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 ZNF470Q6ECI4 717 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 CNTN4Q8IWV2 1026 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 KDM1BQ8NB78 822 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 TXNDC5Q8NBS9 432 aaKnown RBP19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 HEXDCQ8WVB3 486 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 TMA16Q96EY4 203 aaKnown RBP19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 TMEM209Q96SK2 561 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 TRPV6Q9H1D0 765 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 ZBTB26Q9HCK0 441 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 CSNK1G1Q9HCP0 422 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 SFMBT1Q9UHJ3 866 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 NUDT5Q9UKK9 219 aa19.07■□□□□ 0.64
TM9SF1-206ENST00000528669 MAFKO60675 156 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 HLA-DQB2P05538 268 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 TCN1P20061 433 aaPredicted RBP19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 GSTT1P30711 240 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 BRCC3P46736 316 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 ZNF135P52742 658 aaPredicted RBP19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 ART3Q13508 389 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 RNF135Q8IUD6 432 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 FAM156AQ8NDB6 213 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 BHLHE22Q8NFJ8 381 aaPredicted RBP19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 NDNQ99608 321 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 CENPKQ9BS16 269 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 SPATA16Q9BXB7 569 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 COPS7BQ9H9Q2 264 aaPredicted RBP19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 CHST12Q9NRB3 414 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 GTSE1Q9NYZ3 720 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 TCAF1Q9Y4C2 921 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 TTC3P53804 2025 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 SCN4AP35499 1836 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 PEX1O43933 1283 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 ANXA9O76027 345 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 COL6A2P12110 1019 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 PCSK1P29120 753 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 PGFP49763 221 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 CPT1AP50416 773 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 HK2P52789 917 aa19.06■□□□□ 0.64
TM9SF1-206ENST00000528669 TLR1Q15399 786 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms