RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 ATP13A1Q9HD20 1204 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 CD93Q9NPY3 652 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 FBXL12Q9NXK8 326 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 SUSD2Q9UGT4 822 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 DNAI1Q9UI46 699 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 FZD10Q9ULW2 581 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 OR51B4Q9Y5P0 310 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 CEP250Q9BV73 2442 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 PLXNA2O75051 1894 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 TMEM131Q92545 1883 aa7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 TDRD6O60522 2096 aaKnown RBP7.34□□□□□ -1.23
PTP4A2-210ENST00000528253 KNL1Q8NG31 2342 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 A0A0D9SEW6 157 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 METTL12A8MUP2 240 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 C1QTNF3-AMACRE9PGA6 284 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 FAM72CH0Y354 149 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 MCF2LO15068 1137 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 MID1O15344 667 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 DAPK3O43293 454 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 CREB3O43889 395 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 BNIP3LO60238 219 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 SNAP91O60641 907 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 RNASEH2AO75792 299 aaKnown RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 LRIG2O94898 1065 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 SEMA4FO95754 770 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 CFIP05156 583 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 SRCP12931 536 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 SNRPBP14678 240 aaKnown RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 GOT1P17174 413 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 C5AR1P21730 350 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 EPHB2P29323 1055 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 HNRNPH3P31942 346 aaKnown RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 ACSL1P33121 698 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 HTR7P34969 479 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 RECQLP46063 649 aaPredicted RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 PSMD8P48556 350 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 LIMK1P53667 647 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 ATXN3P54252 364 aaPredicted RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 GEMIN4P57678 1058 aaKnown RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 IRX4P78413 519 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 OGDHQ02218 1023 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 CCDC15Q0P6D6 951 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 ELAVL3Q14576 367 aaKnown RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 ACAP1Q15027 740 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 POLD3Q15054 466 aaPredicted RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 TRIM61Q5EBN2 209 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 FAM72AQ5TYM5 149 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 MANEALQ5VSG8 457 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 DCAF12L1Q5VU92 463 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 FAM72DQ6L9T8 149 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 ALKBH5Q6P6C2 394 aaKnown RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 RIPOR1Q6ZS17 1223 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 FAM72BQ86X60 149 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 DNAAF5Q86Y56 855 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 SLC41A1Q8IVJ1 513 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 HDDC3Q8N4P3 179 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 DCAF4L2Q8NA75 395 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 OR7D4Q8NG98 312 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 FNIP1Q8TF40 1166 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 FRS2Q8WU20 508 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 RMDN1Q96DB5 314 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 PSMB7Q99436 277 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 MAGEB5Q9BZ81 275 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 TRIM5Q9C035 493 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 MIR1-1HGQ9H1L0 117 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 PABPC3Q9H361 631 aaKnown RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 DEF6Q9H4E7 631 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 BRD7Q9NPI1 651 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 TMEM9BQ9NQ34 198 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 TMEM74BQ9NUR3 256 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 TMEM248Q9NWD8 314 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 DLL3Q9NYJ7 618 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 PCSK1NQ9UHG2 260 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 EVLQ9UI08 416 aaPredicted RBP7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 VPS51Q9UID3 782 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 SLC6A14Q9UN76 642 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 HS3ST2Q9Y278 367 aa7.33□□□□□ -1.24
PTP4A2-210ENST00000528253 ATXN2Q99700 1313 aaKnown RBP7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 TBC1D3DA0A087WVF3 549 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 TBC1D3IA0A087WXS9 549 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 A0A087X0T9 212 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 TBC1D3EA0A087X179 549 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 TBC1D3KA0A087X1G2 549 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 CXorf51AA0A1B0GTR3 108 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 A0A1B0GTW7 788 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 A0A1W2PP55 124 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 TBC1D3FA6NER0 549 aaPredicted RBP7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 ZSCAN5CA6NGD5 496 aaPredicted RBP7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 FAM47DPA6NHR8 397 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 LRRC72A6NJI9 287 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 PATE3B3GLJ2 98 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 EIF3CLB5ME19 914 aaKnown RBP7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 TBC1D3LB9A6J9 549 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 MYO1FO00160 1098 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 SLC30A4O14863 429 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 ALOX15BO15296 676 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 FGF10O15520 208 aaPredicted RBP7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 AKR1B10O60218 316 aa7.32□□□□□ -1.24
PTP4A2-210ENST00000528253 RAMP2O60895 175 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms