RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 PCDH10Q9P2E7 1040 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 WASF2Q9Y6W5 498 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 ERI2A8K979 691 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 TM9SF1O15321 606 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 MAP3K7O43318 606 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 TLR5O60602 858 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 CNTN5O94779 1100 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 ALDH1A2O94788 518 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 LMNAP02545 664 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 POLBP06746 335 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 ATF6P18850 670 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 RPL10AP62906 217 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 PHEXP78562 749 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 SLC34A1Q06495 639 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 ZNF33AQ06730 810 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 SMARCB1Q12824 385 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 IKBKEQ14164 716 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 KPNB1Q14974 876 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 USP41Q3LFD5 358 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
SOX6-210ENST00000528252 ACSBG2Q5FVE4 666 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 KIAA1841Q6NSI8 718 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 CDHR3Q6ZTQ4 885 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 APOPT1Q96IL0 206 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 SPATA17Q96L03 361 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 FCRL3Q96P31 734 aaPredicted RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 FAM111AQ96PZ2 611 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 ZNF184Q99676 751 aaPredicted RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 MIPEPQ99797 713 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 VN1R3Q9BXE9 311 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 SLC13A1Q9BZW2 595 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 CASS4Q9NQ75 786 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 TDRKHQ9Y2W6 561 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 ZNF711Q9Y462 761 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 SHROOM3Q8TF72 1996 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 COPEO14579 308 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 MATN3O15232 486 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 RFPL1O75677 317 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 PARNO95453 639 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 MT-CYBP00156 380 aaPredicted RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 ERVK-10P10266 1014 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 GRIA2P42262 883 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 NRG1Q02297 640 aaPredicted RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 SULT2A1Q06520 285 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 MAP7Q14244 749 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 PRPSAP1Q14558 356 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 TRIP4Q15650 581 aaPredicted RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 ALFQ53S48 1182 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 SPOUT1Q5T280 376 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 RAP1GAP2Q684P5 730 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 MARK2Q7KZI7 788 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 ATP6V0D2Q8N8Y2 350 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 ZNF75CPQ92670 426 aaPredicted RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 CDKL2Q92772 493 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 ZNF669Q96BR6 464 aaPredicted RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 VWCEQ96DN2 955 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 IGSF21Q96ID5 467 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 BTN2A3PQ96KV6 586 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 TOX2Q96NM4 488 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 SRPK1Q96SB4 655 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 NOL6Q9H6R4 1146 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 LRRC40Q9H9A6 602 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 OLA1Q9NTK5 396 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 TMEM39AQ9NV64 488 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 RBM22Q9NW64 420 aaKnown RBP eCLIP8.35□□□□□ -1.07
SOX6-210ENST00000528252 IPO11Q9UI26 975 aaKnown RBP8.35□□□□□ -1.07
SOX6-210ENST00000528252 PSAT1Q9Y617 370 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 PATJQ8NI35 1801 aa8.35□□□□□ -1.07
SOX6-210ENST00000528252 SLC38A8A6NNN8 435 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 ATP5HO75947 161 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 HOXD12P35452 270 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 ADARP55265 1226 aaKnown RBP8.34□□□□□ -1.07
SOX6-210ENST00000528252 SLC44A4Q53GD3 710 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 SLC8B1Q6J4K2 584 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 FBXL22Q6P050 247 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 SATL1Q86VE3 508 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 ZNF683Q8IZ20 524 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 PPFIBP2Q8ND30 876 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 IGSF8Q969P0 613 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 MFSD3Q96ES6 412 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 LRRC37BQ96QE4 947 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 IL12RB2Q99665 862 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 SIKE1Q9BRV8 207 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 ZYG11BQ9C0D3 744 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 CWH43Q9H720 699 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 GLOD4Q9HC38 313 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 MTRRQ9UBK8 725 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 TBX21Q9UL17 535 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 PHTF1Q9UMS5 762 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 CCDC78A2IDD5 438 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 RNASEH1O60930 286 aaKnown RBP8.34□□□□□ -1.07
SOX6-210ENST00000528252 PSMG1O95456 288 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 RHOQP17081 205 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 NAT1P18440 290 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 ETV4P43268 484 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 NUMBP49757 651 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 SERPINB9P50453 376 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 ERFP50548 548 aa8.34□□□□□ -1.07
SOX6-210ENST00000528252 KCNQ1P51787 676 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms