RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 NAT16Q8N8M0 369 aa19.09■□□□□ 0.65
SMPD1-203ENST00000527275 ATP13A1Q9HD20 1204 aa19.09■□□□□ 0.65
SMPD1-203ENST00000527275 HPS4Q9NQG7 708 aa19.09■□□□□ 0.65
SMPD1-203ENST00000527275 ACTL7BQ9Y614 415 aa19.09■□□□□ 0.65
SMPD1-203ENST00000527275 ANHXE9PGG2 379 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 F5H423 210 aaPredicted RBP19.08■□□□□ 0.65
SMPD1-203ENST00000527275 NFATC1O95644 943 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 ADH1CP00326 375 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 BRAFP15056 766 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 GLDCP23378 1020 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 CD70P32970 193 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 CSKP41240 450 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 SARNPP82979 210 aaKnown RBP19.08■□□□□ 0.65
SMPD1-203ENST00000527275 CDK16Q00536 496 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 HTR4Q13639 388 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 PDGFRLQ15198 375 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 ZNF783Q6ZMS7 281 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 SRRM1Q8IYB3 904 aaKnown RBP19.08■□□□□ 0.65
SMPD1-203ENST00000527275 LRRC39Q96DD0 335 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 XPO6Q96QU8 1125 aaKnown RBP19.08■□□□□ 0.65
SMPD1-203ENST00000527275 TRMT61BQ9BVS5 477 aaKnown RBP19.08■□□□□ 0.65
SMPD1-203ENST00000527275 ACE2Q9BYF1 805 aaPredicted RBP19.08■□□□□ 0.65
SMPD1-203ENST00000527275 ECT2Q9H8V3 914 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 SP110Q9HB58 689 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 XAB2Q9HCS7 855 aaKnown RBP19.08■□□□□ 0.65
SMPD1-203ENST00000527275 INTS9Q9NV88 658 aaKnown RBP19.08■□□□□ 0.65
SMPD1-203ENST00000527275 GTSE1Q9NYZ3 720 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 VPS28Q9UK41 221 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 OR51B4Q9Y5P0 310 aa19.08■□□□□ 0.65
SMPD1-203ENST00000527275 CBX4O00257 560 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 SPAG6O75602 509 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 ADH5P11766 374 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 CCNB1P14635 433 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 GDI1P31150 447 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 MAGEA3P43357 314 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 LMAN2Q12907 356 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 ZBTB17Q13105 803 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 ASTLQ6HA08 431 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-203ENST00000527275 ZNF534Q76KX8 674 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 ALG14Q96F25 216 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 ZNF419Q96HQ0 510 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-203ENST00000527275 KCNK9Q9NPC2 374 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 ABCB8Q9NUT2 735 aa19.08■□□□□ 0.64
SMPD1-203ENST00000527275 KIAA1522Q9P206 1035 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-203ENST00000527275 PSMC3IPQ9P2W1 217 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-203ENST00000527275 VCANP13611 3396 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 TMEM120BA0PK00 339 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 GMNCA6NCL1 334 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 MATN3O15232 486 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 PEX11BO96011 259 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 PTPN3P26045 913 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 ETFBP38117 255 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 GRIA1P42261 906 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 TFF2Q03403 129 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 EFTUD2Q15029 972 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMPD1-203ENST00000527275 SMAD2Q15796 467 aaKnown RBP19.07■□□□□ 0.64
SMPD1-203ENST00000527275 TIGD7Q6NT04 549 aaPredicted RBP19.07■□□□□ 0.64
SMPD1-203ENST00000527275 APCDD1Q8J025 514 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 PDCD7Q8N8D1 485 aaKnown RBP19.07■□□□□ 0.64
SMPD1-203ENST00000527275 CYTH2Q99418 400 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 PHF7Q9BWX1 381 aaPredicted RBP19.07■□□□□ 0.64
SMPD1-203ENST00000527275 KLHL8Q9P2G9 620 aaPredicted RBP19.07■□□□□ 0.64
SMPD1-203ENST00000527275 IGSF9Q9P2J2 1179 aa19.07■□□□□ 0.64
SMPD1-203ENST00000527275 ZC3H7BQ9UGR2 993 aaKnown RBP19.07■□□□□ 0.64
SMPD1-203ENST00000527275 NDUFAB1O14561 156 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 TRIM24O15164 1050 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 HOXC11O43248 304 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-203ENST00000527275 MTSS1O43312 755 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 JCHAINP01591 159 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 PSMB4P28070 264 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 LEXMQ3ZCV2 418 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 FOXR1Q6PIV2 292 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 TRABD2AQ86V40 505 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 TTC8Q8TAM2 541 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 ATXN2LQ8WWM7 1075 aaKnown RBP19.06■□□□□ 0.64
SMPD1-203ENST00000527275 CFAP36Q96G28 342 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 SIGLEC10Q96LC7 697 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 EIF2B3Q9NR50 452 aaKnown RBP19.06■□□□□ 0.64
SMPD1-203ENST00000527275 ACTL7AQ9Y615 435 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 KIF26AQ9ULI4 1882 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-203ENST00000527275 TCRBV9S1A1TA0A576 114 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 KDELR3O43731 214 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 CACNG3O60359 315 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 SNAP91O60641 907 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 PRAMEF11O60813 436 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 PIAS1O75925 651 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 KRT15P19012 456 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 MSH2P43246 934 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 HNRNPH2P55795 449 aaKnown RBP19.06■□□□□ 0.64
SMPD1-203ENST00000527275 OXCT1P55809 520 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 IL10RBQ08334 325 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 SLC10A7Q0GE19 358 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 RUNX3Q13761 415 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 TEX44Q53QW1 395 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 ADGRD1Q6QNK2 874 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 C12orf40Q86WS4 652 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 USP33Q8TEY7 942 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 LMLNQ96KR4 655 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 AGAP3Q96P47 875 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 CCT8L2Q96SF2 557 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms