RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ALKBH4Q9NXW9 302 aa4.2□□□□□ -1.74
CD44-219ENST00000525685 DTX4Q9Y2E6 619 aa4.2□□□□□ -1.74
CD44-219ENST00000525685 LRRFIP2Q9Y608 721 aaKnown RBP4.2□□□□□ -1.74
CD44-219ENST00000525685 NWD2Q9ULI1 1742 aa4.2□□□□□ -1.74
CD44-219ENST00000525685 SLIT2O94813 1529 aa4.2□□□□□ -1.74
CD44-219ENST00000525685 NFAT5O94916 1531 aa4.2□□□□□ -1.74
CD44-219ENST00000525685 OVOS2A0A0J9YW53 1432 aa4.2□□□□□ -1.74
CD44-219ENST00000525685 OVOS2Q6IE36 1432 aa4.2□□□□□ -1.74
CD44-219ENST00000525685 EDC4Q6P2E9 1401 aaKnown RBP4.2□□□□□ -1.74
CD44-219ENST00000525685 TTC21BQ7Z4L5 1316 aa4.2□□□□□ -1.74
CD44-219ENST00000525685 LMO7Q8WWI1 1683 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 KTN1Q86UP2 1357 aaKnown RBP4.19□□□□□ -1.74
CD44-219ENST00000525685 ANKRD26Q9UPS8 1709 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 TMEM247A6NEH6 219 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 NPIPB13A6NJU9 1138 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 NPIPB5A8MRT5 1133 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 NPIPB4C9JG80 1138 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 ADAM10O14672 748 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 HBP1O60381 514 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 METTL18O95568 372 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 CKMT1AP12532 417 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 PGM1P36871 562 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 ALFQ53S48 1182 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 ALG10Q5BKT4 473 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 ALG10BQ5I7T1 473 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 FAM171A1Q5VUB5 890 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 TMEM268Q5VZI3 342 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 ATG16L1Q676U5 607 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 AWAT2Q6E213 333 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 TTLL5Q6EMB2 1281 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 DENND1BQ6P3S1 775 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 BHLHA9Q7RTU4 235 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 MDGA2Q7Z553 956 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 TECPR1Q7Z6L1 1165 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 LRRTM4Q86VH4 590 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 BRSK2Q8IWQ3 736 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 SCN4BQ8IWT1 228 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 NANOGP1Q8N7R0 232 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 FAM110DQ8TAY7 271 aaPredicted RBP4.19□□□□□ -1.74
CD44-219ENST00000525685 CENPIQ92674 756 aaPredicted RBP4.19□□□□□ -1.74
CD44-219ENST00000525685 HMCESQ96FZ2 354 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 CD180Q99467 661 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 ARHGAP39Q9C0H5 1083 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 CTDSP1Q9GZU7 261 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 PAPOLBQ9NRJ5 636 aaKnown RBP4.19□□□□□ -1.74
CD44-219ENST00000525685 C9orf78Q9NZ63 289 aaPredicted RBP4.19□□□□□ -1.74
CD44-219ENST00000525685 LAMP3Q9UQV4 416 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 GDAQ9Y2T3 454 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 PKP3Q9Y446 797 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 AFG3L2Q9Y4W6 797 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 NSD3Q9BZ95 1437 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 KIF7Q2M1P5 1343 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 TTC21AQ8NDW8 1320 aa4.19□□□□□ -1.74
CD44-219ENST00000525685 LTN1O94822 1766 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 COL18A1P39060 1754 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 VWA3AA6NCI4 1184 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 NCAM2O15394 837 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 ZC3H11AO75152 810 aaKnown RBP eCLIP4.18□□□□□ -1.74
CD44-219ENST00000525685 FGBP02675 491 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 CNPP09543 421 aaKnown RBP4.18□□□□□ -1.74
CD44-219ENST00000525685 CTSAP10619 480 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 FCGR2AP12318 317 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 TBL3Q12788 808 aaKnown RBP4.18□□□□□ -1.74
CD44-219ENST00000525685 BYSLQ13895 437 aaKnown RBP4.18□□□□□ -1.74
CD44-219ENST00000525685 NAA25Q14CX7 972 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 NFIL3Q16649 462 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 AP5B1Q2VPB7 878 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 C5orf22Q49AR2 442 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 ISM2Q6H9L7 571 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 HMBOX1Q6NT76 420 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 SHC4Q6S5L8 630 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 UBE2Q1Q7Z7E8 422 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 GALNT7Q86SF2 657 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 GHDCQ8N2G8 530 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 PAQR4Q8N4S7 273 aaPredicted RBP4.18□□□□□ -1.74
CD44-219ENST00000525685 DPP10Q8N608 796 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 TMEM217Q8N7C4 229 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 SH3KBP1Q96B97 665 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 HVCN1Q96D96 273 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 MASTLQ96GX5 879 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 TWNKQ96RR1 684 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 NAP1L4Q99733 375 aaKnown RBP4.18□□□□□ -1.74
CD44-219ENST00000525685 EIF2AK1Q9BQI3 630 aaKnown RBP4.18□□□□□ -1.74
CD44-219ENST00000525685 REEP2Q9BRK0 252 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 HERC2P3Q9BVR0 1158 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 STN1Q9H668 368 aaKnown RBP4.18□□□□□ -1.74
CD44-219ENST00000525685 MLXIPLQ9NP71 852 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 TERF2IPQ9NYB0 399 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 ATRNO75882 1429 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 GLI3P10071 1580 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 AFF2P51816 1311 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 BCL9LQ86UU0 1499 aa4.18□□□□□ -1.74
CD44-219ENST00000525685 CPDO75976 1380 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 KIAA0232Q92628 1395 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 CCDC7Q96M83 1385 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 ABCC6O95255 1503 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 WNK3Q9BYP7 1800 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 KCNJ18B7U540 433 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 SOCS2O14508 198 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 GUCY1B2O75343 617 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms