RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 IL10RAQ13651 578 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 PCOLCEQ15113 449 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ZXDCQ2QGD7 858 aaPredicted RBP7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ZNF385BQ569K4 471 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 Q6ZUG5 572 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 SRGAP1Q7Z6B7 1085 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 IQCA1Q86XH1 822 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 SMAP1Q8IYB5 467 aaPredicted RBP7.42□□□□□ -1.22
NEDD8-203ENST00000524927 UNC5BQ8IZJ1 945 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 CMTM8Q8IZV2 173 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 PRR18Q8N4B5 295 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ZBTB34Q8NCN2 500 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 PIK3C3Q8NEB9 887 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ESR2Q92731 530 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ATP2A3Q93084 1043 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 XYLT2Q9H1B5 865 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 BARX1Q9HBU1 254 aaPredicted RBP7.42□□□□□ -1.22
NEDD8-203ENST00000524927 SUCLA2Q9P2R7 463 aaPredicted RBP7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ZDHHC9Q9Y397 364 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 YIPF1Q9Y548 306 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ASB3Q9Y575 518 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 PCDHA13Q9Y5I0 950 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ANK1P16157 1881 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 H7C4K7 107 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 LAD1O00515 517 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 PHF2O75151 1096 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 USP12O75317 370 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 SMARCA1P28370 1054 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 GABRR2P28476 465 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 RBMS1P29558 406 aaKnown RBP7.41□□□□□ -1.22
NEDD8-203ENST00000524927 AXLP30530 894 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 OPRD1P41143 372 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 ARPP19P56211 112 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 PER3P56645 1201 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 MGAT2Q10469 447 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 BFSP1Q12934 665 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 CLCA4Q14CN2 919 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 ALX1Q15699 326 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 SLC35G1Q2M3R5 365 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 CEP55Q53EZ4 464 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 PPP4R3AQ6IN85 833 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 NOTUMQ6P988 496 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 MFSD6Q6ZSS7 791 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 LARP4Q71RC2 724 aaKnown RBP eCLIP7.41□□□□□ -1.226e-13■■□□□ 12.8
NEDD8-203ENST00000524927 REXO1L1PQ8IX06 675 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 RHOT1Q8IXI2 618 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 ADGRG2Q8IZP9 1017 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 SNX33Q8WV41 574 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 OSCP1Q8WVF1 389 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 GCDHQ92947 438 aaPredicted RBP7.41□□□□□ -1.22
NEDD8-203ENST00000524927 KAT5Q92993 513 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 USP13Q92995 863 aaPredicted RBP7.41□□□□□ -1.22
NEDD8-203ENST00000524927 NLRP4Q96MN2 994 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 YTHDC1Q96MU7 727 aaKnown RBP7.41□□□□□ -1.22
NEDD8-203ENST00000524927 SEC62Q99442 399 aaKnown RBP7.41□□□□□ -1.22
NEDD8-203ENST00000524927 SLC46A2Q9BY10 475 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 DUS2Q9NX74 493 aaKnown RBP7.41□□□□□ -1.22
NEDD8-203ENST00000524927 MAD2L2Q9UI95 211 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 PCDHA10Q9Y5I2 948 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 RBM8AQ9Y5S9 174 aaKnown RBP7.41□□□□□ -1.22
NEDD8-203ENST00000524927 UBE4BO95155 1302 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 ARID2Q68CP9 1835 aa7.41□□□□□ -1.22
NEDD8-203ENST00000524927 MTSS1O43312 755 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 VPS4BO75351 444 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 B3GAT3O94766 335 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 PRKCGP05129 697 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 CD6P30203 668 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 CDC25CP30307 473 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 AVPR1AP37288 418 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 UQCRFS1P47985 274 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 CSNK1EP49674 416 aaKnown RBP7.4□□□□□ -1.22
NEDD8-203ENST00000524927 ZNF268Q14587 947 aaPredicted RBP7.4□□□□□ -1.22
NEDD8-203ENST00000524927 VWA3BQ502W6 1294 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 TRMT11Q7Z4G4 463 aaKnown RBP7.4□□□□□ -1.22
NEDD8-203ENST00000524927 DNAJB7Q7Z6W7 309 aaPredicted RBP7.4□□□□□ -1.22
NEDD8-203ENST00000524927 GGNQ86UU5 652 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 DENND1CQ8IV53 801 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 PLA2G15Q8NCC3 412 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 NSUN7Q8NE18 718 aaKnown RBP7.4□□□□□ -1.22
NEDD8-203ENST00000524927 PPP1R35Q8TAP8 253 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 PSMG2Q969U7 264 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 SLC46A1Q96NT5 459 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 TRIM6Q9C030 488 aaPredicted RBP7.4□□□□□ -1.22
NEDD8-203ENST00000524927 NXF3Q9H4D5 531 aaKnown RBP7.4□□□□□ -1.22
NEDD8-203ENST00000524927 TDP1Q9NUW8 608 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 FBXL5Q9UKA1 691 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 ITGB1BP2Q9UKP3 347 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 VPS4AQ9UN37 437 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 CCL26Q9Y258 94 aa7.4□□□□□ -1.22
NEDD8-203ENST00000524927 CSPG4Q6UVK1 2322 aa7.4□□□□□ -1.23
NEDD8-203ENST00000524927 JMJD1CQ15652 2540 aa7.4□□□□□ -1.23
NEDD8-203ENST00000524927 A0A1B0GTQ1 180 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 IPO8O15397 1037 aaKnown RBP7.39□□□□□ -1.23
NEDD8-203ENST00000524927 PEX14O75381 377 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 ERLIN2O94905 339 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 ENDOD1O94919 500 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 THP07101 528 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 TRIM27P14373 513 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 CKMT2P17540 419 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 ECHS1P30084 290 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms