RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 DUSP19Q8WTR2 217 aa9.11□□□□□ -0.95
PFDN1-207ENST00000524074 DEPDC1BQ8WUY9 529 aa9.11□□□□□ -0.95
PFDN1-207ENST00000524074 ZKSCAN4Q969J2 545 aaPredicted RBP9.11□□□□□ -0.95
PFDN1-207ENST00000524074 PBKQ96KB5 322 aa9.11□□□□□ -0.95
PFDN1-207ENST00000524074 FAM84AQ96KN4 292 aa9.11□□□□□ -0.95
PFDN1-207ENST00000524074 HS6ST2Q96MM7 605 aa9.11□□□□□ -0.95
PFDN1-207ENST00000524074 CITED2Q99967 270 aaPredicted RBP9.11□□□□□ -0.95
PFDN1-207ENST00000524074 SRSF8Q9BRL6 282 aaKnown RBP9.11□□□□□ -0.95
PFDN1-207ENST00000524074 GLIS2Q9BZE0 524 aaPredicted RBP9.11□□□□□ -0.95
PFDN1-207ENST00000524074 ANKRD2Q9GZV1 360 aa9.11□□□□□ -0.95
PFDN1-207ENST00000524074 WDR35Q9P2L0 1181 aa9.11□□□□□ -0.95
PFDN1-207ENST00000524074 HS6ST1O60243 411 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 PSMD10O75832 226 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 SERPINC1P01008 464 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 KRT1P04264 644 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 ENGP17813 658 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 TGM2P21980 687 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 ITPKBP27987 946 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 CIITAP33076 1130 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 GP5P40197 560 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 VPS41P49754 854 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 CLK1P49759 484 aaKnown RBP9.1□□□□□ -0.95
PFDN1-207ENST00000524074 CAMPP49913 170 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 CFHR3Q02985 330 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 RUNX2Q13950 521 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 C15orf59Q2T9L4 293 aaPredicted RBP9.1□□□□□ -0.95
PFDN1-207ENST00000524074 GLE1Q53GS7 698 aaKnown RBP9.1□□□□□ -0.95
PFDN1-207ENST00000524074 TXNDC8Q6A555 127 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 CIR1Q86X95 450 aaPredicted RBP9.1□□□□□ -0.95
PFDN1-207ENST00000524074 CCDC170Q8IYT3 715 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 FAM110DQ8TAY7 271 aaPredicted RBP9.1□□□□□ -0.95
PFDN1-207ENST00000524074 FBXL20Q96IG2 436 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.1□□□□□ -0.95
PFDN1-207ENST00000524074 ZFP64Q9NPA5 681 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 ASAH2Q9NR71 780 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 SLC6A13Q9NSD5 602 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 ASNSD1Q9NWL6 643 aa9.1□□□□□ -0.95
PFDN1-207ENST00000524074 UHRF1BP1LA0JNW5 1464 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 TMEM247A6NEH6 219 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 URADA6NGE7 173 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 PRYO14603 147 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 HLA-DQA2P01906 255 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 ADH4P08319 380 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 TMEM11P17152 192 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 ACO1P21399 889 aaKnown RBP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 SFPQP23246 707 aaKnown RBP eCLIP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 ATP5F1P24539 256 aaPredicted RBP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 IKQ13123 557 aaPredicted RBP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 BAATQ14032 418 aaPredicted RBP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 PPP2R5BQ15173 497 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 RNPS1Q15287 305 aaKnown RBP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 KCNA10Q16322 511 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 ZNF805Q5CZA5 627 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 PLAC9Q5JTB6 97 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 PLBD1Q6P4A8 553 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 SLC2A7Q6PXP3 512 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 LNX2Q8N448 690 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 TMCO5AQ8N6Q1 288 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 SECISBP2LQ93073 1101 aaKnown RBP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 FUBP1Q96AE4 644 aaKnown RBP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 ADAM2Q99965 735 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 TUBB6Q9BUF5 446 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 KIF9Q9HAQ2 790 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 CTNNAL1Q9UBT7 734 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 PADI1Q9ULC6 663 aa9.09□□□□□ -0.95
PFDN1-207ENST00000524074 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.09□□□□□ -0.95
PFDN1-207ENST00000524074 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 GTPBP10A4D1E9 387 aaKnown RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 UNC119BA6NIH7 251 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 VWC2LB2RUY7 222 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 YY2O15391 372 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 PRICKLE3O43900 615 aaPredicted RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 LPXNO60711 386 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 HEXAP06865 529 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 NPSP0C0P6 89 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 NR2F6P10588 404 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 HOXA13P31271 388 aaPredicted RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 CDAP32320 146 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 PIK3CAP42336 1068 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 COPB1P53618 953 aaKnown RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 SNTB1Q13884 538 aaKnown RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 SEMA3AQ14563 771 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 ARL13AQ5H913 290 aaPredicted RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 RAPH1Q70E73 1250 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 MDGA2Q7Z553 956 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 GDPD5Q8WTR4 605 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 RSPH1Q8WYR4 309 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 RFKQ969G6 155 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 TMCO6Q96DC7 493 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 ADAD1Q96M93 576 aaKnown RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 DGAT2Q96PD7 388 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 THUMPD3Q9BV44 507 aaKnown RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 OSGEPL1Q9H4B0 414 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 DTX4Q9Y2E6 619 aa9.08□□□□□ -0.96
PFDN1-207ENST00000524074 REXO2Q9Y3B8 237 aaKnown RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 EPRSP07814 1512 aaKnown RBP9.08□□□□□ -0.96
PFDN1-207ENST00000524074 GLI2P10070 1586 aa9.07□□□□□ -0.96
PFDN1-207ENST00000524074 TSPOAP1O95153 1857 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms