RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	MLYCD	O95822	493 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	PRKAR1B	P31321	381 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	PSMC2	P35998	433 aa	Known RBP	5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	DEUP1	Q05D60	604 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	CTXN3	Q4LDR2	81 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	NAA35	Q5VZE5	725 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	ABLIM2	Q6H8Q1	611 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	ANO7	Q6IWH7	933 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	RINL	Q6ZS11	566 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	PTCHD4	Q6ZW05	846 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	PRSS3P2	Q8NHM4	247 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	MAFA	Q8NHW3	353 aa	Predicted RBP	5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	CPT1B	Q92523	772 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	CCDC17	Q96LX7	622 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	TRIM5	Q9C035	493 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	ARHGAP39	Q9C0H5	1083 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	SLC25A32	Q9H2D1	315 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	PRO3102	Q9H379	93 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	MTMR10	Q9NXD2	777 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	TUBA8	Q9NY65	449 aa	Predicted RBP	5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	USP22	Q9UPT9	525 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	CNTN6	Q9UQ52	1028 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	HPSE	Q9Y251	543 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	TOGARAM1	Q9Y4F4	1720 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	VPS8	Q8N3P4	1428 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	SCN4A	P35499	1836 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	RNF123	Q5XPI4	1314 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	SLIT3	O75094	1523 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	C4A	P0C0L4	1744 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655		H3BNC9	293 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655		J3KTA2	159 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	CD3EAP	O15446	510 aa	Known RBP	5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	CCNT2	O60583	730 aa	Known RBP	5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	PPP6R2	O75170	966 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	PIAS2	O75928	621 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	STARD3NL	O95772	234 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	MT-CO3	P00414	261 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	CHRM5	P08912	532 aa	Predicted RBP	5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	ACADM	P11310	421 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	CREB1	P16220	341 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	SERPINA4	P29622	427 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	MAPK4	P31152	587 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	AKT1	P31749	480 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	MCM5	P33992	734 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	ACTN2	P35609	894 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	TIRAP	P58753	221 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	KRT83	P78385	493 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	TRIP6	Q15654	476 aa	Known RBP	5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	SHC4	Q6S5L8	630 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	MTHFD1L	Q6UB35	978 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	H1FNT	Q75WM6	255 aa	Predicted RBP	5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	SYT13	Q7L8C5	426 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	IRF2BP2	Q7Z5L9	587 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	SFTPA1	Q8IWL2	248 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	WDR60	Q8WVS4	1066 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	GRAMD1A	Q96CP6	724 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	VN1R3	Q9BXE9	311 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	BRD8	Q9H0E9	1235 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	FSCN3	Q9NQT6	498 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	KCND3	Q9UK17	655 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	HSF4	Q9ULV5	492 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	UBR3	Q6ZT12	1888 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	CPSF1	Q10570	1443 aa	Known RBP	5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	PPL	O60437	1756 aa		5.04	□□□□□ -1.6
SREK1-213	ENST00000523655	TTC28	Q96AY4	2481 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	PNMA6E	A0A0J9YXQ4	647 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	SAC3D1	A6NKF1	404 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	TMEM232	C9JQI7	657 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	STX16-NPEPL1	H3BU86	382 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	STX16	O14662	325 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	TAF5L	O75529	589 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	F9	P00740	461 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	ADRB2	P07550	413 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	POR	P16435	677 aa	Predicted RBP	5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	ATF7	P17544	494 aa	Predicted RBP	5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	PSMA4	P25789	261 aa	Known RBP	5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	RFC4	P35249	363 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	RBM5	P52756	815 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	SUMO2	P61956	95 aa	Known RBP	5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	DDR1	Q08345	913 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	GPS1	Q13098	491 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	ACVR2B	Q13705	512 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	BECN1	Q14457	450 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	PSMD6	Q15008	389 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	RPS6KA2	Q15349	733 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	GPR68	Q15743	365 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	CDC37	Q16543	378 aa	Predicted RBP	5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	PRICKLE4	Q2TBC4	344 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	GALNTL6	Q49A17	601 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	TMEM65	Q6PI78	240 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	ZNF813	Q6ZN06	617 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	FAM43B	Q6ZT52	329 aa	Predicted RBP	5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	LRRC8D	Q7L1W4	858 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	RASGRP2	Q7LDG7	609 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	SLC22A17	Q8WUG5	538 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	MAP4K1	Q92918	833 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	RSPRY1	Q96DX4	576 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	MPHOSPH8	Q99549	860 aa		5.03	□□□□□ -1.6
SREK1-213	ENST00000523655	BAG1	Q99933	345 aa	Predicted RBP	5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms