RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 DRAP1Q14919 205 aaPredicted RBP23.16■■□□□ 1.3
PVT1-218ENST00000523328 KIAA1614Q5VZ46 1190 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 PCDH20Q8N6Y1 951 aaKnown RBP23.16■■□□□ 1.3
PVT1-218ENST00000523328 LMX1AQ8TE12 382 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 CCDC97Q96F63 343 aaPredicted RBP23.16■■□□□ 1.3
PVT1-218ENST00000523328 MED8Q96G25 268 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 BOCQ9BWV1 1114 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.16■■□□□ 1.3
PVT1-218ENST00000523328 IPO11Q9UI26 975 aaKnown RBP23.16■■□□□ 1.3
PVT1-218ENST00000523328 STAP1Q9ULZ2 295 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 IGLON5A6NGN9 336 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 PYCARD-AS1I3L0S3 204 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 FPGTO14772 594 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 TCEA3O75764 348 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 PDX1P52945 283 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 SNX16P57768 344 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 PFN3P60673 137 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 ARF5P84085 180 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 SLC20A2Q08357 652 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 NR0B2Q15466 257 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 CARD16Q5EG05 197 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 RETSATQ6NUM9 610 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 LRRC31Q6UY01 552 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 ZNF783Q6ZMS7 281 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 ZSCAN30Q86W11 494 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 RBFAQ8N0V3 343 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 TBCBQ99426 244 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 IL12RB2Q99665 862 aa23.15■■□□□ 1.3
PVT1-218ENST00000523328 GCATO75600 419 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 CD160O95971 181 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 ABL2P42684 1182 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 RNASE9P60153 205 aaKnown RBP23.14■■□□□ 1.29
PVT1-218ENST00000523328 PTK2Q05397 1052 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 DEUP1Q05D60 604 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 CLEC14AQ86T13 490 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 ZDHHC17Q8IUH5 632 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 ASB12Q8WXK4 309 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 SPON2Q9BUD6 331 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 TCEAL2Q9H3H9 227 aaPredicted RBP23.14■■□□□ 1.29
PVT1-218ENST00000523328 CLMPQ9H6B4 373 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 SYNCQ9H7C4 482 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 ATP13A1Q9HD20 1204 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 PLCB1Q9NQ66 1216 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 GGT7Q9UJ14 662 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 AJAP1Q9UKB5 411 aaPredicted RBP23.14■■□□□ 1.29
PVT1-218ENST00000523328 PNMA8BQ9ULN7 279 aaPredicted RBP23.14■■□□□ 1.29
PVT1-218ENST00000523328 FCF1Q9Y324 198 aaKnown RBP23.14■■□□□ 1.29
PVT1-218ENST00000523328 ACTL7AQ9Y615 435 aa23.14■■□□□ 1.29
PVT1-218ENST00000523328 BIN1O00499 593 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 MUSKO15146 869 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 TSPAN6O43657 245 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 F9P00740 461 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 CLCN1P35523 988 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 KRT9P35527 623 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 DNA2P51530 1060 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 C1QBPQ07021 282 aaKnown RBP23.13■■□□□ 1.29
PVT1-218ENST00000523328 CLN3Q13286 438 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 SGCGQ13326 291 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 ACBD5Q5T8D3 534 aaPredicted RBP23.13■■□□□ 1.29
PVT1-218ENST00000523328 SLC35F3Q8IY50 421 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 ARL14Q8N4G2 192 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 DENND6BQ8NEG7 585 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 WDR36Q8NI36 951 aaKnown RBP23.13■■□□□ 1.29
PVT1-218ENST00000523328 VOPP1Q96AW1 172 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 ZDHHC6Q9H6R6 413 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 SPASTQ9UBP0 616 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 PAXBP1Q9Y5B6 917 aa23.13■■□□□ 1.29
PVT1-218ENST00000523328 AHCTF1Q8WYP5 2266 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 SPTA1P02549 2419 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 SRGAP2O75044 1071 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 KRT10P13645 584 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 MLLT3P42568 568 aaPredicted RBP23.12■■□□□ 1.29
PVT1-218ENST00000523328 SLC25A52Q3SY17 297 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 SMYD5Q6GMV2 418 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 FOXR1Q6PIV2 292 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 GBP6Q6ZN66 633 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 CCDC81Q6ZN84 652 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 SLC47A2Q86VL8 602 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 BTN2A2Q8WVV5 523 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 HECAQ9UBI9 543 aaPredicted RBP23.12■■□□□ 1.29
PVT1-218ENST00000523328 APOBEC3BQ9UH17 382 aaKnown RBP23.12■■□□□ 1.29
PVT1-218ENST00000523328 HECTD1Q9ULT8 2610 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 ITM2BQ9Y287 266 aa23.12■■□□□ 1.29
PVT1-218ENST00000523328 C16orf96A6NNT2 1141 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 TNFSF15O95150 251 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 PON1P27169 355 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 GKP32189 559 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 GNA12Q03113 381 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 C1orf61Q13536 156 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 EXOC3L4Q17RC7 722 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 ARL13BQ3SXY8 428 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 PRRT3Q5FWE3 981 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 C6orf132Q5T0Z8 1188 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 BNIPLQ7Z465 357 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 PLPP6Q8IY26 295 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 WDR48Q8TAF3 677 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 NAT6Q93015 286 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 RAB7BQ96AH8 199 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 CENPTQ96BT3 561 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 LRRC61Q9BV99 259 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms