RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 KIF20BQ96Q89 1820 aa4.9□□□□□ -1.62
VPS37A-205ENST00000519515 COL22A1Q8NFW1 1626 aaPredicted RBP4.9□□□□□ -1.62
VPS37A-205ENST00000519515 TBC1D3DA0A087WVF3 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3IA0A087WXS9 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3EA0A087X179 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3BA6NDS4 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3LB9A6J9 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 STMND1H3BQB6 276 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 RPP40O75818 363 aaKnown RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 ZBTB11O95625 1053 aaPredicted RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 HSP90AB1P08238 724 aaKnown RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3HP0C7X1 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TNFSF4P23510 183 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 KLRC2P26717 231 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 CLCN5P51795 746 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 RBM6P78332 1123 aaKnown RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 CALD1Q05682 793 aaKnown RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 KIF5AQ12840 1032 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 RAB30Q15771 203 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 DUSP6Q16828 381 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 ZNF569Q5MCW4 686 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 ARL6IP4Q66PJ3 421 aaKnown RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3GQ6DHY5 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3CQ6IPX1 549 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 C16orf82Q7Z2V1 217 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TBC1D3Q8IZP1 549 aaPredicted RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 TMEM217Q8N7C4 229 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 NAA15Q9BXJ9 866 aaKnown RBP4.9□□□□□ -1.63
VPS37A-205ENST00000519515 CEP83Q9Y592 693 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 PCDH11XQ9BZA7 1347 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 PCDH11YQ9BZA8 1340 aa4.9□□□□□ -1.63
VPS37A-205ENST00000519515 PRSS47A8MTI9 375 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 SMTNL1A8MU46 457 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 MS4A18H0YCH9 400 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 HNRNPDLO14979 420 aaKnown RBP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 LINC01565O15544 149 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 HTATSF1O43719 755 aaKnown RBP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 DDNO94850 711 aaPredicted RBP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 FCGR1AP12314 374 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 KLRK1P26718 216 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 COASYQ13057 564 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 SAFBQ15424 915 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 TDRD12Q587J7 1177 aaKnown RBP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 RINT1Q6NUQ1 792 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 MCM10Q7L590 875 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 DPP9Q86TI2 863 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 FMNL3Q8IVF7 1028 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 CLIP4Q8N3C7 705 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 DPP10Q8N608 796 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 CLEC4CQ8WTT0 213 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 TM7SF3Q9NS93 570 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 ZBTB1Q9Y2K1 713 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 LAS1LQ9Y4W2 734 aaKnown RBP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 COPG1Q9Y678 874 aaKnown RBP4.89□□□□□ -1.63
VPS37A-205ENST00000519515 SHPRHQ149N8 1683 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 USP54Q70EL1 1684 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 ATRNO75882 1429 aa4.89□□□□□ -1.63
VPS37A-205ENST00000519515 PHRF1Q9P1Y6 1649 aaKnown RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 DENND3A2RUS2 1198 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 VWA5AO00534 786 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 PMM2O15305 246 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 RNMTO43148 476 aaKnown RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 ALDH18A1P54886 795 aaKnown RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 TMPRSS3P57727 454 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 RHAGQ02094 409 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 ZBTB16Q05516 673 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 EEF1A2Q05639 463 aaKnown RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 TEFQ10587 303 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 DCTN1Q14203 1278 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 C9orf57Q5W0N0 161 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 CREB3L2Q70SY1 520 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 TMEM200AQ86VY9 491 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 WDR63Q8IWG1 891 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 LRRC57Q8N9N7 239 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 FAM110DQ8TAY7 271 aaPredicted RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 APOLD1Q96LR9 279 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 THUMPD2Q9BTF0 503 aaKnown RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 SARGQ9BW04 601 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 SORBS1Q9BX66 1292 aaKnown RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 ERRFI1Q9UJM3 462 aaPredicted RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 PEAK1Q9H792 1746 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 ANKRD26Q9UPS8 1709 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 MAP3K5Q99683 1374 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 PLEKHG2Q9H7P9 1386 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 COL14A1Q05707 1796 aaKnown RBP4.88□□□□□ -1.63
VPS37A-205ENST00000519515 OVOS2A0A0G2JMS6 1433 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 NCAPD2Q15021 1401 aa4.88□□□□□ -1.63
VPS37A-205ENST00000519515 MEGF6O75095 1541 aa4.87□□□□□ -1.63
VPS37A-205ENST00000519515 TCRBV7S3A2A0A539 114 aa4.87□□□□□ -1.63
VPS37A-205ENST00000519515 SAC3D1A6NKF1 404 aa4.87□□□□□ -1.63
VPS37A-205ENST00000519515 KIF28PB7ZC32 967 aa4.87□□□□□ -1.63
VPS37A-205ENST00000519515 MYL3P08590 195 aa4.87□□□□□ -1.63
VPS37A-205ENST00000519515 AKT1P31749 480 aa4.87□□□□□ -1.63
VPS37A-205ENST00000519515 SEC61A1P61619 476 aaKnown RBP4.87□□□□□ -1.63
VPS37A-205ENST00000519515 TRAF2Q12933 501 aa4.87□□□□□ -1.63
VPS37A-205ENST00000519515 FAM76BQ5HYJ3 339 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms