RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 MYO1GB0I1T2 1018 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 NFKB1P19838 968 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 MATKP42679 507 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 NRLP54845 237 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 RUNX1T1Q06455 604 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 CUZD1Q86UP6 607 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 AQP12AQ8IXF9 295 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 CENPLQ8N0S6 344 aaPredicted RBP8.6□□□□□ -1.03
PCM1-212ENST00000519253 RAB2BQ8WUD1 216 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 SKA2Q8WVK7 121 aaPredicted RBP8.6□□□□□ -1.03
PCM1-212ENST00000519253 CLEC4DQ8WXI8 215 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 OR52B2Q96RD2 323 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
PCM1-212ENST00000519253 C3orf18Q9UK00 162 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 FBXO5Q9UKT4 447 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 CNTN6Q9UQ52 1028 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 PIN4Q9Y237 131 aaKnown RBP8.6□□□□□ -1.03
PCM1-212ENST00000519253 AKAP11Q9UKA4 1901 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 SH3PXD2BA1X283 911 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 MED26O95402 600 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 HNRNPLP14866 589 aaKnown RBP eCLIP8.6□□□□□ -1.035e-13■■■□□ 14.7
PCM1-212ENST00000519253 CPB1P15086 417 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 MSH3P20585 1137 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 GRIK1P39086 918 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 ADIGQ0VDE8 80 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 PCLAFQ15004 111 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 PERM1Q5SV97 790 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 CCNYL2Q5T2Q4 361 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 BORAQ6PGQ7 559 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 SIAH1Q8IUQ4 282 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 ALDH16A1Q8IZ83 802 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 TTC30BQ8N4P2 665 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 ZNF276Q8N554 614 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 AFG1LQ8WV93 481 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 IRGQQ8WZA9 623 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 POP5Q969H6 163 aaKnown RBP8.6□□□□□ -1.03
PCM1-212ENST00000519253 DGCR6LQ9BY27 220 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 GLIS2Q9BZE0 524 aaPredicted RBP8.6□□□□□ -1.03
PCM1-212ENST00000519253 ZFYVE28Q9HCC9 887 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 MYOZ2Q9NPC6 264 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 TRAF6Q9Y4K3 522 aa8.6□□□□□ -1.03
PCM1-212ENST00000519253 ADGRA2Q96PE1 1338 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 PNMA8CA0A1B0GUJ8 204 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 A0A1B0GVG6 124 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 CLDN25C9JDP6 229 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 AP2A1O95782 977 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 UMPSP11172 480 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 UBA1P22314 1058 aaKnown RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 TKTL1P51854 596 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 GTF2H3Q13889 308 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 AMHR2Q16671 573 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 IL23RQ5VWK5 629 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 FASTKD5Q7L8L6 764 aaKnown RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 SLC26A9Q7LBE3 791 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 RBM22Q9NW64 420 aaKnown RBP eCLIP8.59□□□□□ -1.031e-6■■■□□ 15.8
PCM1-212ENST00000519253 TDRKHQ9Y2W6 561 aaKnown RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 TRIM17Q9Y577 477 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 SPDYE16A6NNV3 312 aaPredicted RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 EVPLLA8MZ36 301 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 DPYSL4O14531 572 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 GPD2P43304 727 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 RPS9P46781 194 aaKnown RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 POLD3Q15054 466 aaPredicted RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 CAND1Q86VP6 1230 aaKnown RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 ADGRF2Q8IZF7 708 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 ZNF420Q8TAQ5 688 aaPredicted RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 GNPTGQ9UJJ9 305 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 CCDC159P0C7I6 412 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 AIF1P55008 147 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 RSBN1Q5VWQ0 802 aaPredicted RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 FAM9CQ8IZT9 166 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 RMDN1Q96DB5 314 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 TUBGCP4Q9UGJ1 667 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 NOD1Q9Y239 953 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 PTGES3LE9PB15 166 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 ERCC2P18074 760 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 GJA8P48165 433 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 ZNF132P52740 706 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 CSTF3Q12996 717 aaKnown RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 RFTN1Q14699 578 aaPredicted RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 RFX4Q33E94 735 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 EEF1DP3Q658K8 133 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 OLFML1Q6UWY5 402 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 FAM126BQ8IXS8 530 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 FBXO27Q8NI29 283 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 SLC2A14Q8TDB8 520 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 APOL4Q9BPW4 351 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 DEFB129Q9H1M3 183 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 SLC38A7Q9NVC3 462 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 KANSL3Q9P2N6 904 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 AREL1O15033 823 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 YBX3P16989 372 aaKnown RBP eCLIP8.59□□□□□ -1.036e-7■□□□□ 9.3
PCM1-212ENST00000519253 PROZP22891 400 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 ASPAP45381 313 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 IREB2P48200 963 aaKnown RBP8.59□□□□□ -1.03
PCM1-212ENST00000519253 MPP1Q00013 466 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.59□□□□□ -1.03
PCM1-212ENST00000519253 MAPK11Q15759 364 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 DPYSL2Q16555 572 aa8.59□□□□□ -1.03
PCM1-212ENST00000519253 CACHD1Q5VU97 1274 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms