RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CDK10Q15131 360 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 PMF1Q6P1K2 205 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 NEK10Q6ZWH5 1172 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 FKBP9P1Q75LS8 142 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 ZNF534Q76KX8 674 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 CCDC24Q8N4L8 307 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 OR2T34Q8NGX1 318 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 OR2T3Q8NH03 318 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 RMDN1Q96DB5 314 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 MAGED4Q96JG8 741 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 VPS35Q96QK1 796 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 WDR18Q9BV38 432 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 CCM2LQ9NUG4 571 aaPredicted RBP13.72□□□□□ -0.21
PABPC1-208ENST00000519004 GMPR2Q9P2T1 348 aaKnown RBP13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SLC9A2Q9UBY0 812 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 OAZ3Q9UMX2 235 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 PMF1-BGLAPU3KQ54 211 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 G3V2L1 256 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 XYLBO75191 536 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 CCNKO75909 580 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 HSPA1AP0DMV8 641 aaKnown RBP13.71□□□□□ -0.21
PABPC1-208ENST00000519004 HSPA1BP0DMV9 641 aaKnown RBP13.71□□□□□ -0.21
PABPC1-208ENST00000519004 NAGAP17050 411 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 GSTM2P28161 218 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 GTF2BQ00403 316 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 POLD3Q15054 466 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-208ENST00000519004 TBC1D10BQ4KMP7 808 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-208ENST00000519004 TBCELQ5QJ74 424 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 NEK5Q6P3R8 708 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 LYPD8Q6UX82 237 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 DPP8Q6V1X1 898 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-208ENST00000519004 LYSMD2Q8IV50 215 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 HACE1Q8IYU2 909 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 SIMC1Q8NDZ2 872 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 FLAD1Q8NFF5 587 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 SGCDQ92629 289 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 MOCOSQ96EN8 888 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 BTBD2Q9BX70 525 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 PAK5Q9P286 719 aa13.71□□□□□ -0.21
PABPC1-208ENST00000519004 WARS2Q9UGM6 360 aaKnown RBP13.71□□□□□ -0.21
PABPC1-208ENST00000519004 JUNP05412 331 aaKnown RBP13.71□□□□□ -0.22
PABPC1-208ENST00000519004 KRT8P05787 483 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 EIF2DP41214 584 aaKnown RBP13.71□□□□□ -0.22
PABPC1-208ENST00000519004 MAGEA6P43360 314 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 PRELPP51888 382 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 GSTO1P78417 241 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 ADARB1P78563 741 aaKnown RBP13.71□□□□□ -0.22
PABPC1-208ENST00000519004 NIPAL4Q0D2K0 466 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 NOMO1Q15155 1222 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 HIST2H2ACQ16777 129 aaPredicted RBP13.71□□□□□ -0.22
PABPC1-208ENST00000519004 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 NXNQ6DKJ4 435 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 LRRC8EQ6NSJ5 796 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 PADI6Q6TGC4 694 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 OTOP3Q7RTS5 596 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 DHFR2Q86XF0 187 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 LGI2Q8N0V4 545 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 PIK3C3Q8NEB9 887 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 MAP6Q96JE9 813 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 MFSD14AQ96MC6 490 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF560Q96MR9 790 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 CALN1Q9BXU9 219 aa13.71□□□□□ -0.22
PABPC1-208ENST00000519004 ILKAPQ9H0C8 392 aaPredicted RBP13.71□□□□□ -0.22
PABPC1-208ENST00000519004 RPAP3Q9H6T3 665 aaPredicted RBP13.71□□□□□ -0.22
PABPC1-208ENST00000519004 SMPD3Q9NY59 655 aaPredicted RBP13.71□□□□□ -0.22
PABPC1-208ENST00000519004 EVPLLA8MZ36 301 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 AP3B1O00203 1094 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 LRCH4O75427 683 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 GSNP06396 782 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 APRTP07741 180 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 IL2RBP14784 551 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CTRB1P17538 263 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 TFE3P19532 575 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 AXLP30530 894 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF76P36508 570 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 GRIA1P42261 906 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CCR10P46092 362 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 SNRPFP62306 86 aaKnown RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CBX2Q14781 532 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 TAF5Q15542 800 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 BRDTQ58F21 947 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 TJAP1Q5JTD0 557 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CTRB2Q6GPI1 263 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 SPARTQ8N0X7 666 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 PLD6Q8N2A8 252 aaKnown RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 GATA5Q9BWX5 397 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ALOXE3Q9BYJ1 711 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 SDCBP2Q9H190 292 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 UPF3AQ9H1J1 476 aaKnown RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 WDR6Q9NNW5 1121 aaKnown RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ACSS2Q9NR19 701 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ADPRHL2Q9NX46 363 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 MTMR10Q9NXD2 777 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CACNA2D2Q9NY47 1150 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ISPDA4D126 451 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 B8ZZF3 427 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms