RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SCML1Q9UN30 329 aa6.24□□□□□ -1.41
PABPC1-207ENST00000518716 SRPRBQ9Y5M8 271 aaKnown RBP6.24□□□□□ -1.41
PABPC1-207ENST00000518716 MORC2Q9Y6X9 1032 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-207ENST00000518716 U3KQA8 63 aa6.24□□□□□ -1.41
PABPC1-207ENST00000518716 ICE1Q9Y2F5 2266 aa6.24□□□□□ -1.41
PABPC1-207ENST00000518716 COL27A1Q8IZC6 1860 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-207ENST00000518716 EIF3DO15371 548 aaKnown RBP eCLIP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 SIGLEC6O43699 453 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 SLC28A2O43868 658 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 TRIM13O60858 407 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 STK10O94804 968 aaKnown RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 DNTTP04053 509 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 MPOP05164 745 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 FAM200BP0CF97 657 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 KRT10P13645 584 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 IDEP14735 1019 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 ITGB6P18564 788 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 ARRB1P49407 418 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 CASP4P49662 377 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 NDST1P52848 882 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 TRPC3Q13507 836 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 TSNAXIP1Q2TAA8 658 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 ARL13BQ3SXY8 428 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 LINC00303Q3SY05 128 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 ZC3H12AQ5D1E8 599 aaKnown RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 RAB41Q5JT25 222 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 C9orf64Q5T6V5 341 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 RRAGBQ5VZM2 374 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 ZNF776Q68DI1 518 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 UBE3DQ7Z6J8 389 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 ADAT2Q7Z6V5 191 aaKnown RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 PCGF5Q86SE9 256 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 IQCHQ86VS3 1027 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 DENND1CQ8IV53 801 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 LSMEM2Q8N112 164 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 MFSD2AQ8NA29 543 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 KDM1BQ8NB78 822 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 XXYLT1Q8NBI6 393 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 RNF214Q8ND24 703 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 OR2T34Q8NGX1 318 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 PARD3BQ8TEW8 1205 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 MRGPRX3Q96LB0 322 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 CLIC6Q96NY7 704 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 CDK5RAP1Q96SZ6 601 aaKnown RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 PAIP2Q9BPZ3 127 aaKnown RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 UBXN6Q9BZV1 441 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 MTG2Q9H4K7 406 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 POLR1BQ9H9Y6 1135 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 GDF3Q9NR23 364 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 STARD5Q9NSY2 213 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 FAM49BQ9NUQ9 324 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 KBTBD4Q9NVX7 518 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 DMAC2Q9NW81 257 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 FBXL12Q9NXK8 326 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 SUN2Q9UH99 717 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 FBXO9Q9UK97 447 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 FZD4Q9ULV1 537 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 TPX2Q9ULW0 747 aaKnown RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 PLA2G4CQ9UP65 541 aa6.23□□□□□ -1.41
PABPC1-207ENST00000518716 RP1L1Q8IWN7 2480 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-207ENST00000518716 CLEC18AA5D8T8 446 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 LRRIQ3A6PVS8 624 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-207ENST00000518716 CDRT15L2A8MXV6 281 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 MID1O15344 667 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 SUV39H1O43463 412 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 OPA1O60313 960 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 ASS1P00966 412 aaKnown RBP6.22□□□□□ -1.41
PABPC1-207ENST00000518716 NTRK1P04629 796 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 CYBBP04839 570 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 RALAP11233 206 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 PABPC1P11940 636 aaKnown RBP6.22□□□□□ -1.41
PABPC1-207ENST00000518716 CKMT1AP12532 417 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 MAN1A1P33908 653 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 NTF4P34130 210 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 SGSHP51688 502 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 AP3M2P53677 418 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 ASIC1P78348 528 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 DAB2P98082 770 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 EFEMP1Q12805 493 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 CST6Q15828 149 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 ZNF699Q32M78 642 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 HNRNPA1L2Q32P51 320 aaKnown RBP6.22□□□□□ -1.41
PABPC1-207ENST00000518716 ZACNQ401N2 412 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 TTC31Q49AM3 519 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-207ENST00000518716 FNDC3BQ53EP0 1204 aaKnown RBP6.22□□□□□ -1.41
PABPC1-207ENST00000518716 MPPE1Q53F39 396 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 ZNF667Q5HYK9 610 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 C1orf220Q5T0J3 134 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 MPP7Q5T2T1 576 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 ADGRF1Q5T601 910 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 BROXQ5VW32 411 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 ICE2Q659A1 982 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 MBLAC2Q68D91 279 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 PM20D1Q6GTS8 502 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 CLEC18BQ6UXF7 455 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 KDM7AQ6ZMT4 941 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 CCDC73Q6ZRK6 1079 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 CHST9Q7L1S5 443 aa6.22□□□□□ -1.41
PABPC1-207ENST00000518716 BRAPQ7Z569 592 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms