RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 CSRP3P50461 194 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 CATSPERGQ6ZRH7 1159 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 DEFB106AQ8N104 65 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 PELI3Q8N2H9 469 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 OR9I1Q8NGQ6 314 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 OR6B3Q8NGW1 331 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 HM13Q8TCT9 377 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 FAM149B1Q96BN6 582 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 GPR20Q99678 358 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 FDXACB1Q9BRP7 624 aaPredicted RBP12.52□□□□□ -0.41
PCM1-203ENST00000517545 MLPHQ9BV36 600 aaPredicted RBP12.52□□□□□ -0.41
PCM1-203ENST00000517545 OSBPL2Q9H1P3 480 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 UTP6Q9NYH9 597 aaKnown RBP12.52□□□□□ -0.41
PCM1-203ENST00000517545 MID2Q9UJV3 735 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 PHIPQ8WWQ0 1821 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 SCN1AP35498 2009 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 SOWAHBA6NEL2 793 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 SLCO1B7G3V0H7 640 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 DLGAP1O14490 977 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 STAMBPO95630 424 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 APOA4P06727 396 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 ARF4P18085 180 aaPredicted RBP12.52□□□□□ -0.41
PCM1-203ENST00000517545 CD247P20963 164 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 SULT1E1P49888 294 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 PFKPQ01813 784 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 XKR5Q6UX68 686 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 CEP97Q8IW35 865 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 MAELQ96JY0 434 aaKnown RBP12.52□□□□□ -0.41
PCM1-203ENST00000517545 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 CASS4Q9NQ75 786 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 SLC38A7Q9NVC3 462 aa12.52□□□□□ -0.41
PCM1-203ENST00000517545 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCM1-203ENST00000517545 PSME4Q14997 1843 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 TMEM221A6NGB7 291 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 FAM72CH0Y354 149 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 PGK1P00558 417 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 COL6A2P12110 1019 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 CD68P34810 354 aaPredicted RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 PSMD8P48556 350 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 CSE1LP55060 971 aaKnown RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 ZBED5Q49AG3 693 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 FAM72AQ5TYM5 149 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 SMYD5Q6GMV2 418 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 FAM72DQ6L9T8 149 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 ZNF280DQ6N043 979 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 LYSMD3Q7Z3D4 306 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 FAM72BQ86X60 149 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 MFSD6LQ8IWD5 586 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 CBR4Q8N4T8 237 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 TXNDC5Q8NBS9 432 aaKnown RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 RDH11Q8TC12 318 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 TSNARE1Q96NA8 513 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 NAA50Q9GZZ1 169 aaKnown RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 MUC3BQ9H195 1237 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 PFDN4Q9NQP4 134 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 A0A1W2PPW3 197 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 FAM155AB1AL88 458 aaPredicted RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 AHSGP02765 367 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 MCF2P10911 925 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 GRIA3P42263 894 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 HK2P52789 917 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 C1QTNF8P60827 252 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 FASTKQ14296 549 aaKnown RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 DCAF6Q58WW2 860 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 OTUD1Q5VV17 481 aaPredicted RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 TTC33Q6PID6 262 aaPredicted RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 NT5DC4Q86YG4 428 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 ZDHHC17Q8IUH5 632 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 DENND6AQ8IWF6 608 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 SPPL2BQ8TCT7 592 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 UHRF1Q96T88 793 aaPredicted RBP12.51□□□□□ -0.41
PCM1-203ENST00000517545 SPAG4Q9NPE6 437 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 VPS45Q9NRW7 570 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
PCM1-203ENST00000517545 EVPLQ92817 2033 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 TPST1O60507 370 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 ATP6V1B2P21281 511 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 SLC7A2P52569 658 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 ESRRGP62508 458 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 MPP1Q00013 466 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 TGFBIQ15582 683 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 GPR107Q5VW38 600 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 OGFOD2Q6N063 350 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 PPP4R4Q6NUP7 873 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 EPHX4Q8IUS5 362 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 RNF168Q8IYW5 571 aaPredicted RBP12.5□□□□□ -0.41
PCM1-203ENST00000517545 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 COPS5Q92905 334 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 GPR78Q96P69 363 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 CYP4F12Q9HCS2 524 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 PRMT7Q9NVM4 692 aaPredicted RBP12.5□□□□□ -0.41
PCM1-203ENST00000517545 A0A087WXM4 84 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 HMGB2P26583 209 aaKnown RBP12.5□□□□□ -0.41
PCM1-203ENST00000517545 NME3Q13232 169 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 CTBP1Q13363 440 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 PMS2P3Q13401 168 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 SLC12A1Q13621 1099 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 FGD3Q5JSP0 725 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 KCTD11Q693B1 232 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms