RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LINC00854A0A1B0GVQ3 168 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 FITM1A5D6W6 292 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC9B1P1A6NJY1 282 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ANXA2P2A6NMY6 339 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 NOTOA8MTQ0 251 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 EIF3DO15371 548 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 NKX2-8O15522 239 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 CA12O43570 354 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 CEP104O60308 925 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 MITFO75030 526 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 AKAP3O75969 853 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 KCNK5O95279 499 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 BCL10O95999 233 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 CYBBP04839 570 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 NCF1P14598 390 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ARF4P18085 180 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 HSPA1LP34931 641 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 HTR7P34969 479 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ARL4AP40617 200 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 MTIF2P46199 727 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 GCLCP48506 637 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 TOB1P50616 345 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 PNLIPRP2P54317 469 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SNU13P55769 128 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ELP6Q0PNE2 266 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 TCF15Q12870 199 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 PPIGQ13427 754 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SNX1Q13596 522 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 BYSLQ13895 437 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 CBFBQ13951 182 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 CCNIQ14094 377 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ACOX1Q15067 660 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 PPP1R7Q15435 360 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 IMMTQ16891 758 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 AP5B1Q2VPB7 878 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 GLE1Q53GS7 698 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 FBLN7Q53RD9 439 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 TEX35Q5T0J7 233 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ERICH6BQ5W0A0 696 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 KRT40Q6A162 431 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 MOXD1Q6UVY6 613 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ANGPTL8Q6UXH0 198 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 GLDNQ6ZMI3 551 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ETV3LQ6ZN32 361 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 PRRT2Q7Z6L0 340 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SPPL2CQ8IUH8 684 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 DHX40Q8IX18 779 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SYNE4Q8N205 404 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 FITM2Q8N6M3 262 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 RBM15BQ8NDT2 890 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 PSD4Q8NDX1 1056 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 NPIPB3Q92617 1050 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ALG3Q92685 438 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 GCDHQ92947 438 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 TEKT1Q969V4 418 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 DTNBP1Q96EV8 351 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ERO1AQ96HE7 468 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 CDRT15Q96T59 188 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 HNRNPABQ99729 332 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SMOQ99835 787 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZPBPQ9BS86 351 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 THUMPD2Q9BTF0 503 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 CARD6Q9BX69 1037 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 NPLQ9BXD5 320 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 GPR88Q9GZN0 384 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 KATNBL1Q9H079 304 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 TMEM206Q9H813 350 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SYTL2Q9HCH5 934 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 C20orf141Q9NUB4 165 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SETD4Q9NVD3 440 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 INTS13Q9NVM9 706 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 BABAM1Q9NWV8 329 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SOHLH2Q9NX45 425 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 PSD3Q9NYI0 1048 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 CFAP45Q9UL16 551 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 NDRG4Q9ULP0 352 aaKnown RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 PLAGL1Q9UM63 463 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 UBE2J1Q9Y385 318 aaPredicted RBP4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 SNX11Q9Y5W9 270 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 HCFC2Q9Y5Z7 792 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ACEP12821 1306 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 GXYLT2A0PJZ3 443 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 HMX2A2RU54 273 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CTAGE15A4D2H0 777 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 OOEPA6NGQ2 149 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM90A8PA6NJQ4 464 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 KPNA7A9QM74 516 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 IFNL4K9M1U5 179 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 NRP1O14786 923 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 RASGRF2O14827 1237 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 IFIT3O14879 490 aaKnown RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 TRIM24O15164 1050 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 MAGEB3O15480 346 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 DHX15O43143 795 aaKnown RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 BBOX1O75936 387 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 RAD17O75943 681 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 TOX4O94842 621 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 WDR47O94967 919 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 AKR7A3O95154 331 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SIX3O95343 332 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms