RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PRODH2Q9UF12 536 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 NIPSNAP3AQ9UFN0 247 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 RIMKLBQ9ULI2 386 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 PLCL2Q9UPR0 1127 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 SNX9Q9Y5X1 595 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 PSAT1Q9Y617 370 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 GPR179Q6PRD1 2367 aa-0.65□□□□□ -2.51
RNU6-542P-201ENST00000516405 A0A0G2JLW4 131 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 hDV102S1A0JD36 115 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 ARHGAP10A1A4S6 786 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 CPED1A4D0V7 1026 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF840PA6NDX5 716 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 LRRC14BA6NHZ5 514 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 C3orf70A6NLC5 250 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 TTC34A8MYJ7 566 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 CCNT2O60583 730 aaKnown RBP-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 KPNA6O60684 536 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 FKBP9O95302 570 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 C9P02748 559 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF44P15621 663 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 EDNRBP24530 442 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 MTNR1BP49286 362 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 MTHFSP49914 203 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 GATMP50440 423 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 UCP3P55916 312 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 CYP4A11Q02928 519 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 EXOSC9Q06265 439 aaKnown RBP-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 PKP1Q13835 747 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 NECTIN1Q15223 517 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 C3orf36Q3SXR2 165 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 BAIAP2L2Q6UXY1 529 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 FKBP9P1Q75LS8 142 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 MIGA2Q7L4E1 593 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 PALB2Q86YC2 1186 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 ODF3L1Q8IXM7 274 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 PRR22Q8IZ63 422 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 SPARTQ8N0X7 666 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 DDX51Q8N8A6 666 aaKnown RBP eCLIP-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 KCNH5Q8NCM2 988 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 CLRN3Q8NCR9 226 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF540Q8NDQ6 660 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 GPT2Q8TD30 523 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 GTF3AQ92664 365 aaKnown RBP-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 STAMBPL1Q96FJ0 436 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 VPS50Q96JG6 964 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 SERAC1Q96JX3 654 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 GPR78Q96P69 363 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 GDF15Q99988 308 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 SYT15Q9BQS2 421 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 PANK3Q9H999 370 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF446Q9NWS9 450 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF319Q9P2F9 582 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 LRWD1Q9UFC0 647 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF229Q9UJW7 825 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 PCDHB2Q9Y5E7 798 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 CACNA1DQ01668 2161 aa-0.66□□□□□ -2.52
RNU6-542P-201ENST00000516405 COL5A3P25940 1745 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 KDM4EB2RXH2 506 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 CD3EAPO15446 510 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 DFNA5O60443 496 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GAGE7O76087 117 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLITRK3O94933 977 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 LCKP06239 509 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 PARP1P09874 1014 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZSCAN5DPP0CG00 497 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GAGE12FP0CL80 117 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GAGE12GP0CL81 117 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GAGE12IP0CL82 117 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 ARP10275 920 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 MDKP21741 143 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 NFKBIAP25963 317 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 RPL3P39023 403 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC5A3P53794 718 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 CDH12P55289 794 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 EIF4A1P60842 406 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 SATB1Q01826 763 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GAGE1Q13065 139 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GAGE4Q13068 117 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 SF3A1Q15459 793 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZC2HC1CQ53FD0 456 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GLE1Q53GS7 698 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 PLA1AQ53H76 456 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 CELF3Q5SZQ8 465 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 PDSS1Q5T2R2 415 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GFRALQ6UXV0 394 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 BRD3OSQ6XYD6 125 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 TMEM219Q86XT9 240 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 LAS2Q8IYD9 372 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 PPM1NQ8N819 430 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 MRGPRDQ8TDS7 321 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 NSUN6Q8TEA1 469 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 IP6K1Q92551 441 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 MTFMTQ96DP5 389 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 GIMAP5Q96F15 307 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 PRAC1Q96KF2 57 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF582Q96NG8 517 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 RSPO3Q9BXY4 272 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 TRIM2Q9C040 744 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 CCSER1Q9C0I3 900 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms