RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CKMT1AP12532 417 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 RHOQP17081 205 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 SDC4P31431 198 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 ABL2P42684 1182 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 PTPN9P43378 593 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 MAPKAPK2P49137 400 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 DAB2P98082 770 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 E2F1Q01094 437 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 PTP4A2Q12974 167 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 FZD2Q14332 565 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 ARL13BQ3SXY8 428 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 HS1BP3Q53T59 392 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 TPRG1LQ5T0D9 272 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 CDKAL1Q5VV42 579 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 KYAT3Q6YP21 454 aaKnown RBP12.42□□□□□ -0.42
SNHG4-208ENST00000514110 KDM7AQ6ZMT4 941 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 PLPP6Q8IY26 295 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 RYBPQ8N488 228 aaPredicted RBP12.42□□□□□ -0.42
SNHG4-208ENST00000514110 FAM174AQ8TBP5 190 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 ENOX1Q8TC92 643 aaKnown RBP12.42□□□□□ -0.42
SNHG4-208ENST00000514110 CENPIQ92674 756 aaPredicted RBP12.42□□□□□ -0.42
SNHG4-208ENST00000514110 IFT43Q96FT9 208 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 APOLD1Q96LR9 279 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 KLF6Q99612 283 aaPredicted RBP12.42□□□□□ -0.42
SNHG4-208ENST00000514110 NLRC4Q9NPP4 1024 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 TMEM248Q9NWD8 314 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 NLGN3Q9NZ94 848 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 ITM2BQ9Y287 266 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 U3KQA8 63 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 TDRD6O60522 2096 aaKnown RBP12.42□□□□□ -0.42
SNHG4-208ENST00000514110 CHD5Q8TDI0 1954 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 SPTY2D1-AS1A0A0U1RR47 76 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 CXorf51AA0A1B0GTR3 108 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 C16orf96A6NNT2 1141 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 SCAMP1O15126 338 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 SPINT1O43278 529 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 OPA1O60313 960 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 GSRP00390 522 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 PLEKP08567 350 aaPredicted RBP12.41□□□□□ -0.42
SNHG4-208ENST00000514110 UNGP13051 313 aaPredicted RBP12.41□□□□□ -0.42
SNHG4-208ENST00000514110 RFC1P35251 1148 aaPredicted RBP12.41□□□□□ -0.42
SNHG4-208ENST00000514110 HDAC4P56524 1084 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 HNRNPKP61978 463 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNHG4-208ENST00000514110 ATXN7L2Q5T6C5 722 aaPredicted RBP12.41□□□□□ -0.42
SNHG4-208ENST00000514110 STRADAQ7RTN6 431 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 DCP2Q8IU60 420 aaKnown RBP12.41□□□□□ -0.42
SNHG4-208ENST00000514110 FAM172AQ8WUF8 416 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 TBC1D31Q96DN5 1066 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 LENG8Q96PV6 779 aaPredicted RBP12.41□□□□□ -0.42
SNHG4-208ENST00000514110 TRPM6Q9BX84 2022 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 C1QTNF2Q9BXJ5 285 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 MAGEH1Q9H213 219 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 KLF15Q9UIH9 416 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 SIK3Q9Y2K2 1263 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 PCDHB1Q9Y5F3 818 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 RAI2Q9Y5P3 530 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 KNTC1P50748 2209 aa12.41□□□□□ -0.42
SNHG4-208ENST00000514110 K7ESM1 405 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 KRIT1O00522 736 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 TSPAN6O43657 245 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 RAMP2O60895 175 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 CSF2P04141 144 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 UGT2B4P06133 528 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 ALPPL2P10696 532 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 KRT3P12035 628 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 NME1P15531 152 aaKnown RBP12.4□□□□□ -0.42
SNHG4-208ENST00000514110 ETFBP38117 255 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 RABIFP47224 123 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 GEMIN4P57678 1058 aaKnown RBP12.4□□□□□ -0.42
SNHG4-208ENST00000514110 SNRPD1P62314 119 aaKnown RBP12.4□□□□□ -0.42
SNHG4-208ENST00000514110 SGCGQ13326 291 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 POLD3Q15054 466 aaPredicted RBP12.4□□□□□ -0.42
SNHG4-208ENST00000514110 CLEC16AQ2KHT3 1053 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 MYLK3Q32MK0 819 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 ZNF805Q5CZA5 627 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 CDCP2Q5VXM1 449 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 WDR59Q6PJI9 974 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 TRIM72Q6ZMU5 477 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 LRRC69Q6ZNQ3 347 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 PARGQ86W56 976 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 PYROXD2Q8N2H3 581 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 FAM181AQ8N9Y4 354 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 NETO2Q8NC67 525 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 ZNF548Q8NEK5 533 aaPredicted RBP12.4□□□□□ -0.42
SNHG4-208ENST00000514110 OR2AP1Q8NGE2 309 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 SNIP1Q8TAD8 396 aaKnown RBP12.4□□□□□ -0.42
SNHG4-208ENST00000514110 FGF11Q92914 225 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 NTAN1Q96AB6 310 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 RAB7BQ96AH8 199 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 KLHL32Q96NJ5 620 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 PRORYQ9H606 182 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 RETREG1Q9H6L5 497 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 NOL6Q9H6R4 1146 aaKnown RBP12.4□□□□□ -0.42
SNHG4-208ENST00000514110 LMBRD1Q9NUN5 540 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 FANCLQ9NW38 375 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 ADAM22Q9P0K1 906 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 HPCAL4Q9UM19 191 aa12.4□□□□□ -0.42
SNHG4-208ENST00000514110 NEMP2A6NFY4 417 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 NEMP1O14524 444 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 FPGTO14772 594 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms