RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 INO80DQ53TQ3 878 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 TIGD7Q6NT04 549 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 TTC27Q6P3X3 843 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 SRLQ86TD4 932 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 FAM124AQ86V42 546 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 CREG2Q8IUH2 290 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 FAM160A2Q8N612 972 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 TEX26Q8N6G2 289 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 PRELID2Q8N945 189 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 FAM71DQ8N9W8 422 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 KDM1BQ8NB78 822 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 GLIS1Q8NBF1 620 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 OR2AP1Q8NGE2 309 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 OR2T3Q8NH03 318 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 SLC35B2Q8TB61 432 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 PIP4K2CQ8TBX8 421 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 CCDC110Q8TBZ0 833 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 NSMCE1Q8WV22 266 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 HTR3CQ8WXA8 447 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 OR8D1Q8WZ84 308 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 ARRDC3Q96B67 414 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 MRGPRX1Q96LB2 322 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 ZNF599Q96NL3 588 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 SMIM14Q96QK8 99 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 CEP44Q9C0F1 390 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 PRDM16Q9HAZ2 1276 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 USP29Q9HBJ7 922 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 NOD2Q9HC29 1040 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 POLMQ9NP87 494 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 PRMT8Q9NR22 394 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 UBP1Q9NZI7 540 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 SEPT3Q9UH03 358 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 EBF1Q9UH73 591 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 IL36AQ9UHA7 158 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 SAR1BQ9Y6B6 198 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 SDK1Q7Z5N4 2213 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 SPAG17Q6Q759 2223 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 TARSL2A2RTX5 802 aaKnown RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 PGRMC1O00264 195 aaKnown RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 KPNA3O00505 521 aaPredicted RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 NEBLO76041 1014 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 APBB3O95704 486 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 IGSF6O95976 241 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 GSRP00390 522 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 PRKCGP05129 697 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 UGT2B4P06133 528 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 ZSCAN5DPP0CG00 497 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 TCP1P17987 556 aaKnown RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 NFKB1P19838 968 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 MAGEA9P43362 315 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 RECQLP46063 649 aaPredicted RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 TERF1P54274 439 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 SNRPD1P62314 119 aaKnown RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 MRPS25P82663 173 aaKnown RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 XRCC4Q13426 336 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 HNRNPDQ14103 355 aaKnown RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 PTPRRQ15256 657 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 ANGPT1Q15389 498 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 OASLQ15646 514 aaKnown RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 SYCP2LQ5T4T6 812 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 FAXCQ5TGI0 409 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 ZSWIM9Q86XI8 627 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 CAMK1DQ8IU85 385 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 CDKL3Q8IVW4 592 aaPredicted RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 ZNF567Q8N184 647 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 AADATQ8N5Z0 425 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 DEFB119Q8N690 84 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 SPATA22Q8NHS9 363 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 CCDC26Q8TAB7 109 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 ISG20Q96AZ6 181 aaKnown RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 GDAP1L1Q96MZ0 367 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 PSKH2Q96QS6 385 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 SEMA3CQ99985 751 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 MGME1Q9BQP7 344 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 HEPHQ9BQS7 1158 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 C1QTNF1Q9BXJ1 281 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 BRD8Q9H0E9 1235 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 RSPH9Q9H1X1 276 aaPredicted RBP11.48□□□□□ -0.57
HTT-213ENST00000513806 SCUBE2Q9NQ36 999 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 CYP8B1Q9UNU6 501 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 ATP8A1Q9Y2Q0 1164 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 PCDHGC4Q9Y5F7 938 aa11.48□□□□□ -0.57
HTT-213ENST00000513806 PLXNA2O75051 1894 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 A0A1W2PP55 124 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 BCLAF3A2AJT9 711 aaKnown RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 HACD1B0YJ81 288 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 URI1O94763 535 aaPredicted RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 MT-CYBP00156 380 aaPredicted RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 MMP2P08253 660 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 CR2P20023 1033 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 SLC8A1P32418 973 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 CD86P42081 329 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 RENBPP51606 427 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 TRAF2Q12933 501 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 OLIG2Q13516 323 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 BYSLQ13895 437 aaKnown RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 RFTN1Q14699 578 aaPredicted RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 TRIP13Q15645 432 aaPredicted RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 CST6Q15828 149 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms