RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 TBATAQ96M53 351 aa11.41□□□□□ -0.58
RNF4-218ENST00000513284 CPEB1Q9BZB8 566 aaKnown RBP11.41□□□□□ -0.58
RNF4-218ENST00000513284 TNKS2Q9H2K2 1166 aa11.41□□□□□ -0.58
RNF4-218ENST00000513284 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.41□□□□□ -0.58
RNF4-218ENST00000513284 GGT7Q9UJ14 662 aa11.41□□□□□ -0.58
RNF4-218ENST00000513284 TUBD1Q9UJT1 453 aa11.41□□□□□ -0.58
RNF4-218ENST00000513284 VPS28Q9UK41 221 aa11.41□□□□□ -0.58
RNF4-218ENST00000513284 MAPK8IP1Q9UQF2 711 aa11.41□□□□□ -0.58
RNF4-218ENST00000513284 ATP6V1DQ9Y5K8 247 aa11.41□□□□□ -0.58
RNF4-218ENST00000513284 SDK2Q58EX2 2172 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 FPGTO14772 594 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 MTSS1O43312 755 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 AP1G1O43747 822 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 STX10O60499 249 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 CNTN5O94779 1100 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 ENDOD1O94919 500 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 APOEP02649 317 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 PRNPP04156 253 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 RNF224P0DH78 156 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 PFKFB1P16118 471 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 POU3F2P20265 443 aaPredicted RBP11.4□□□□□ -0.58
RNF4-218ENST00000513284 BRD2P25440 801 aaKnown RBP11.4□□□□□ -0.58
RNF4-218ENST00000513284 MXI1P50539 228 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 MAPK10P53779 464 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 OXCT1P55809 520 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 AUHQ13825 339 aaKnown RBP11.4□□□□□ -0.58
RNF4-218ENST00000513284 C5orf22Q49AR2 442 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 ZCWPW2Q504Y3 356 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 FAXCQ5TGI0 409 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 LINGO4Q6UY18 593 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 SFTPA2Q8IWL1 248 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 ATP11CQ8NB49 1132 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 GRIN3AQ8TCU5 1115 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 ASB12Q8WXK4 309 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 PMEPA1Q969W9 287 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 TMEM74Q96NL1 305 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 MBNL1Q9NR56 388 aaKnown RBP11.4□□□□□ -0.58
RNF4-218ENST00000513284 SIRPGQ9P1W8 387 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 IL36AQ9UHA7 158 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 VPS51Q9UID3 782 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 DAAM1Q9Y4D1 1078 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 PCDHB11Q9Y5F2 797 aa11.4□□□□□ -0.58
RNF4-218ENST00000513284 A0A0D9SEW6 157 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 A0A1B0GVL5 298 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 KRT38O76015 456 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 RHOBTB3O94955 611 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 PAEPP09466 180 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 CCL4P13236 92 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 L1CAMP32004 1257 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 NOS2P35228 1153 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 IGFALSP35858 605 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 GGCXP38435 758 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 ABL2P42684 1182 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 GPD2P43304 727 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 NEK3P51956 506 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 LRMPQ12912 555 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 SGCGQ13326 291 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 C16orf72Q14CZ0 275 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 TCEA2Q15560 299 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 ALFQ53S48 1182 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 TTC39BQ5VTQ0 682 aaPredicted RBP11.39□□□□□ -0.59
RNF4-218ENST00000513284 KCTD16Q68DU8 428 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 TMEM270Q6UE05 265 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 PARS2Q7L3T8 475 aaKnown RBP11.39□□□□□ -0.59
RNF4-218ENST00000513284 SLITRK4Q8IW52 837 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 GUF1Q8N442 669 aaKnown RBP11.39□□□□□ -0.59
RNF4-218ENST00000513284 ARL10Q8N8L6 244 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 ATP6V0D2Q8N8Y2 350 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 Q8N9G6 341 aaPredicted RBP11.39□□□□□ -0.59
RNF4-218ENST00000513284 PCDH19Q8TAB3 1148 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 KAT5Q92993 513 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 FAM149B1Q96BN6 582 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 PPP1R9BQ96SB3 815 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 SEMA6CQ9H3T2 930 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 DYRK4Q9NR20 520 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 VANGL2Q9ULK5 521 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 SRPK3Q9UPE1 567 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 ITM2BQ9Y287 266 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
RNF4-218ENST00000513284 RNF215Q9Y6U7 377 aa11.39□□□□□ -0.59
RNF4-218ENST00000513284 I6L893 689 aaPredicted RBP11.38□□□□□ -0.59
RNF4-218ENST00000513284 M0QYV0 167 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 NKX2-8O15522 239 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 EPB41P11171 864 aaKnown RBP11.38□□□□□ -0.59
RNF4-218ENST00000513284 LIFP15018 202 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 ITGB7P26010 798 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 EIF4A3P38919 411 aaKnown RBP11.38□□□□□ -0.59
RNF4-218ENST00000513284 PKP1Q13835 747 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 RABGAP1LQ5R372 815 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 LVRNQ6Q4G3 990 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 ZNF683Q8IZ20 524 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 GPR156Q8NFN8 814 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 TSACCQ96A04 125 aaPredicted RBP11.38□□□□□ -0.59
RNF4-218ENST00000513284 ABHD17AQ96GS6 310 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 RPRD1AQ96P16 312 aaPredicted RBP11.38□□□□□ -0.59
RNF4-218ENST00000513284 EPAS1Q99814 870 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 SLC13A1Q9BZW2 595 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 B3GNT4Q9C0J1 378 aa11.38□□□□□ -0.59
RNF4-218ENST00000513284 SCAND2PQ9GZW5 306 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms