RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 NSMCE1Q8WV22 266 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 FGF14Q92915 247 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 TTC17Q96AE7 1141 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 ACDQ96AP0 544 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 CHFRQ96EP1 664 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 C9orf72Q96LT7 481 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 ZIM3Q96PE6 472 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 PPP1R2P1Q96PQ5 205 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
DHFR-206ENST00000513048 CDX2Q99626 313 aaPredicted RBP9.49□□□□□ -0.89
DHFR-206ENST00000513048 SEMA3CQ99985 751 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 KXD1Q9BQD3 176 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 C2orf49Q9BVC5 232 aaPredicted RBP9.49□□□□□ -0.89
DHFR-206ENST00000513048 EBF3Q9H4W6 596 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 LRRC40Q9H9A6 602 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 LRRC4CQ9HCJ2 640 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 XAB2Q9HCS7 855 aaKnown RBP9.49□□□□□ -0.89
DHFR-206ENST00000513048 FAM53CQ9NYF3 392 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 UBP1Q9NZI7 540 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 GGA2Q9UJY4 613 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 SLC27A6Q9Y2P4 619 aa9.49□□□□□ -0.89
DHFR-206ENST00000513048 AAR2Q9Y312 384 aaKnown RBP9.49□□□□□ -0.89
DHFR-206ENST00000513048 COL4A2P08572 1712 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 MUC22E2RYF6 1773 aaPredicted RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 LOC285095A0A1B0GVY8 99 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 H3BQ06 376 aaPredicted RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 K7ERQ8 282 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 SMAD6O43541 496 aaKnown RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 USP12O75317 370 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 TULP3O75386 442 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ADH1CP00326 375 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 AGTP01019 485 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 SHBGP04278 402 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ABHD2P08910 425 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 TSHRP16473 764 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 PSMC3P17980 439 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ELK3P41970 407 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 CD86P42081 329 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 SERPINH1P50454 418 aaKnown RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 WNT3AP56704 352 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 SLC20A2Q08357 652 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 MESP2Q0VG99 397 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 MPP3Q13368 585 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 MSLNQ13421 630 aaPredicted RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 HTR4Q13639 388 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 GRM2Q14416 872 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 SLC29A2Q14542 456 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ZNF235Q14590 738 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 GEN1Q17RS7 908 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 CCDC38Q502W7 563 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 HP1BP3Q5SSJ5 553 aaPredicted RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 ALS2CLQ60I27 953 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 RETSATQ6NUM9 610 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 GPR153Q6NV75 609 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 LRIG3Q6UXM1 1119 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 Q7L0L9 218 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ANKMY2Q8IV38 441 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 CCDC117Q8IWD4 279 aaPredicted RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 ZBED8Q8IZ13 594 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 MICALL1Q8N3F8 863 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.48□□□□□ -0.89
DHFR-206ENST00000513048 NAT16Q8N8M0 369 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ZNF557Q8N988 423 aaPredicted RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 FBXO36Q8NEA4 188 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 OR52K1Q8NGK4 314 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 UBLCP1Q8WVY7 318 aaPredicted RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 MYLIPQ8WY64 445 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ATP2A3Q93084 1043 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 GUCD1Q96NT3 240 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 NUDCD1Q96RS6 583 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 TRIB3Q96RU7 358 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 TBL1YQ9BQ87 522 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 APOL2Q9BQE5 337 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 FICDQ9BVA6 458 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 CINPQ9BW66 212 aaPredicted RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 POLR1EQ9GZS1 481 aaKnown RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 ECT2Q9H8V3 914 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 ARNT2Q9HBZ2 717 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 NOD2Q9HC29 1040 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 VPS45Q9NRW7 570 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 THG1LQ9NWX6 298 aaKnown RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 PLAAQ9Y263 795 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 HS3ST2Q9Y278 367 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 FCF1Q9Y324 198 aaKnown RBP9.48□□□□□ -0.89
DHFR-206ENST00000513048 MYLKQ15746 1914 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 MIA3Q5JRA6 1907 aa9.48□□□□□ -0.89
DHFR-206ENST00000513048 REV3LO60673 3130 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 INSIG1O15503 277 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 MBTPS2O43462 519 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 PMPCBO75439 489 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 C1QAP02745 245 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 ATXN1LP0C7T5 689 aaKnown RBP9.47□□□□□ -0.89
DHFR-206ENST00000513048 SRCP12931 536 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 MGAT1P26572 445 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 OPRD1P41143 372 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 SLC6A11P48066 632 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 CSNK1DP48730 415 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 LMAN1P49257 510 aa9.47□□□□□ -0.89
DHFR-206ENST00000513048 STK19P49842 368 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms