RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ABHD10Q9NUJ1 306 aa16.76■□□□□ 0.27
DDX41-213ENST00000512027 ETNK2Q9NVF9 386 aa16.76■□□□□ 0.27
DDX41-213ENST00000512027 LHX3Q9UBR4 397 aa16.76■□□□□ 0.27
DDX41-213ENST00000512027 GGT7Q9UJ14 662 aa16.76■□□□□ 0.27
DDX41-213ENST00000512027 ZFR2Q9UPR6 939 aaKnown RBP16.76■□□□□ 0.27
DDX41-213ENST00000512027 CABIN1Q9Y6J0 2220 aa16.76■□□□□ 0.27
DDX41-213ENST00000512027 TRPM6Q9BX84 2022 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 SHROOM3Q8TF72 1996 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 UPK3BL1B0FP48 263 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 UPK3BL2E5RIL1 263 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 VILLO15195 856 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 SLC31A1O15431 190 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 INSIG1O15503 277 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 MFAP3LO75121 409 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 PCDH8O95206 1070 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 RARAP10276 462 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 ADRB3P13945 408 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 ITGB7P26010 798 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 HTR7P34969 479 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 PCK1P35558 622 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 GJC1P36383 396 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 ABL2P42684 1182 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 PAPOLAP51003 745 aaKnown RBP16.75■□□□□ 0.27
DDX41-213ENST00000512027 NEK3P51956 506 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 RHOAP61586 193 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 SNRPD1P62314 119 aaKnown RBP16.75■□□□□ 0.27
DDX41-213ENST00000512027 SLC25A11Q02978 314 aaKnown RBP16.75■□□□□ 0.27
DDX41-213ENST00000512027 FOXC1Q12948 553 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 CYTH1Q15438 398 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 ASTE1Q2TB18 679 aaPredicted RBP16.75■□□□□ 0.27
DDX41-213ENST00000512027 NAPEPLDQ6IQ20 393 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 IL27RAQ6UWB1 636 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 PRPF39Q86UA1 669 aaKnown RBP16.75■□□□□ 0.27
DDX41-213ENST00000512027 OR8K1Q8NGG5 319 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 ZNF564Q8TBZ8 553 aaPredicted RBP16.75■□□□□ 0.27
DDX41-213ENST00000512027 KLHL32Q96NJ5 620 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 HDAC8Q9BY41 377 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 PDFQ9HBH1 243 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.75■□□□□ 0.27
DDX41-213ENST00000512027 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 ITM2BQ9Y287 266 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 BTBD3Q9Y2F9 522 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 FRYQ5TBA9 3013 aa16.75■□□□□ 0.27
DDX41-213ENST00000512027 SPEGQ15772 3267 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 CXorf51AA0A1B0GTR3 108 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 ZSCAN5CA6NGD5 496 aaPredicted RBP16.74■□□□□ 0.27
DDX41-213ENST00000512027 DFFAO00273 331 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 SPINK2P20155 84 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 AMPD1P23109 780 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 PMLP29590 882 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 SSR1P43307 286 aaKnown RBP16.74■□□□□ 0.27
DDX41-213ENST00000512027 NDST2P52849 883 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 SIM1P81133 766 aaPredicted RBP16.74■□□□□ 0.27
DDX41-213ENST00000512027 SLC14A1Q13336 389 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 DPYSQ14117 519 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 PIGHQ14442 188 aaPredicted RBP16.74■□□□□ 0.27
DDX41-213ENST00000512027 SLC18A3Q16572 532 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 MYLK3Q32MK0 819 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 FBXL19Q6PCT2 694 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 SETD7Q8WTS6 366 aaKnown RBP16.74■□□□□ 0.27
DDX41-213ENST00000512027 GDAP1L1Q96MZ0 367 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 DEF6Q9H4E7 631 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 CAAP1Q9H8G2 361 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 CTTNBP2NLQ9P2B4 639 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 UBA2Q9UBT2 640 aaPredicted RBP16.74■□□□□ 0.27
DDX41-213ENST00000512027 IP6K2Q9UHH9 426 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 LRRK1Q38SD2 2015 aa16.74■□□□□ 0.27
DDX41-213ENST00000512027 C16orf96A6NNT2 1141 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 EIF3CLB5ME19 914 aaKnown RBP16.73■□□□□ 0.27
DDX41-213ENST00000512027 SPINT1O43278 529 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 PRAMEF11O60813 436 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 PIGNO95427 931 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 IGSF6O95976 241 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 ITIH2P19823 946 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 RGRP47804 291 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
DDX41-213ENST00000512027 ACAP1Q15027 740 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 DPYSL2Q16555 572 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 ZNF423Q2M1K9 1284 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 ZNF284Q2VY69 593 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 SETMARQ53H47 684 aaPredicted RBP16.73■□□□□ 0.27
DDX41-213ENST00000512027 INO80DQ53TQ3 878 aaPredicted RBP16.73■□□□□ 0.27
DDX41-213ENST00000512027 AFMIDQ63HM1 303 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 HORMAD1Q86X24 394 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 PSTKQ8IV42 348 aaKnown RBP16.73■□□□□ 0.27
DDX41-213ENST00000512027 PLPP6Q8IY26 295 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 NIPA2Q8N8Q9 360 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 CSPG4P5Q96PW8 444 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 EIF3CQ99613 913 aaKnown RBP16.73■□□□□ 0.27
DDX41-213ENST00000512027 PCDH18Q9HCL0 1135 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 KLHL11Q9NVR0 708 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 FADS3Q9Y5Q0 445 aa16.73■□□□□ 0.27
DDX41-213ENST00000512027 ARHGAP42A6NI28 874 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 H3BRJ5 948 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 TLR4O00206 839 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 AKR1B10O60218 316 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 POP4O95707 220 aaKnown RBP16.72■□□□□ 0.27
DDX41-213ENST00000512027 CD48P09326 243 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 ZNF883P0CG24 379 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 CCT8P50990 548 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms