RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 PHTF2Q8N3S3 785 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCYOX1LQ8NBM8 494 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 OR2T3Q8NH03 318 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DTX3LQ8TDB6 740 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GIPC2Q8TF65 315 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SKA2Q8WVK7 121 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EEF2KMTQ96G04 330 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MYCBPQ99417 103 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LBHD1Q9BQE6 289 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RHNO1Q9BSD3 238 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CRNKL1Q9BZJ0 848 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ASCC2Q9H1I8 757 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 AZI2Q9H6S1 392 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 WDR41Q9HAD4 459 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PARVGQ9HBI0 331 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GOPCQ9HD26 462 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RIC8BQ9NVN3 520 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DDX56Q9NY93 547 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MID2Q9UJV3 735 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANAPC2Q9UJX6 822 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 UTS2RQ9UKP6 389 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PNMA8BQ9ULN7 279 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SF3B6Q9Y3B4 125 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TNPO3Q9Y5L0 923 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCINQ9Y6U3 715 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MYOCOSA0A1B0GUC4 107 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLRF2D3W0D1 207 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM47E-STBD1D6RA91 191 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 H0YJX3 145 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TNFRSF10AO00220 468 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAN1A2O60476 641 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 UBOX5O94941 541 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 P4HBP07237 508 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM191BP0C7N4 346 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MYL2P10916 166 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FSHRP23945 695 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADRA1AP35348 466 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT20P35900 424 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ALDH1A3P47895 512 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 AFF1P51825 1210 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PGGT1BP53609 377 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SKP1P63208 163 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 IGBP1P78318 339 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TCP10Q12799 353 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TP53BP2Q13625 1128 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TNFAIP1Q13829 316 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 OXA1LQ15070 435 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIP10Q15642 601 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MICAQ29983 383 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SV2CQ496J9 727 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GPR158Q5T848 1215 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DENND2CQ68D51 928 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TTBK2Q6IQ55 1244 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC8EQ6NSJ5 796 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTFR2Q6P444 385 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC8BQ6P9F7 803 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 UTS2BQ765I0 119 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABI3BPQ7Z7G0 1075 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRPL10Q7Z7H8 261 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRGPREQ86SM8 312 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DENND6AQ8IWF6 608 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEFF1Q8IYR6 380 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RASGEF1AQ8N9B8 481 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM81AQ8TBF8 368 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 NUDT8Q8WV74 236 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SNX19Q92543 992 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM74Q96NL1 305 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FNBP1Q96RU3 617 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM31Q9BZY9 425 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TNMDQ9H2S6 317 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM245Q9H330 911 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MINDY3Q9H8M7 445 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TYW1Q9NV66 732 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ING3Q9NXR8 418 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MPP6Q9NZW5 540 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMPRSS11EQ9UL52 423 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CADP27708 2225 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC35F4A4IF30 521 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM150BA6NC51 233 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SFI1A8K8P3 1242 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GOLGA8SH3BPF8 625 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 AP3B1O00203 1094 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPINT1O43278 529 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 AOC2O75106 756 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SKAP2O75563 359 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DGKIO75912 1065 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT37O76014 449 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GFPT2O94808 682 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 WISP1O95388 367 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZIC2O95409 532 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ONECUT2O95948 504 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 HLA-DQB1P01920 261 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MYL1P05976 194 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GNAO1P09471 354 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ALDOCP09972 364 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 VAV1P15498 845 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GJA1P17302 382 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PFKLP17858 780 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 HOXD10P28358 340 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAPK4P31152 587 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms