RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 SPRED2Q7Z698 418 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 KRT222Q8N1A0 295 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 CELF5Q8N6W0 485 aaKnown RBP9.26□□□□□ -0.93
NR1I3-230ENST00000511944 DCAF4L2Q8NA75 395 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 SH3RF2Q8TEC5 729 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 GDPD5Q8WTR4 605 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 ARNTL2Q8WYA1 636 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 SMG7Q92540 1137 aaKnown RBP9.26□□□□□ -0.93
NR1I3-230ENST00000511944 COL26A1Q96A83 441 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 TMA16Q96EY4 203 aaKnown RBP9.26□□□□□ -0.93
NR1I3-230ENST00000511944 HMCESQ96FZ2 354 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 SERPINB12Q96P63 405 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 SLC22A12Q96S37 553 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 ACE2Q9BYF1 805 aaPredicted RBP9.26□□□□□ -0.93
NR1I3-230ENST00000511944 SLC2A11Q9BYW1 496 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 STMN4Q9H169 189 aaPredicted RBP9.26□□□□□ -0.93
NR1I3-230ENST00000511944 SLC25A51Q9H1U9 297 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 EPB41L4BQ9H329 900 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 SP110Q9HB58 689 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 PDFQ9HBH1 243 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 GLOD4Q9HC38 313 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 GKN1Q9NS71 199 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 MARK1Q9P0L2 795 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 CFAP97Q9P2B7 532 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 RSPH14Q9UHP6 348 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 PLAAQ9Y263 795 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 PCDHGC4Q9Y5F7 938 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 NFS1Q9Y697 457 aa9.26□□□□□ -0.93
NR1I3-230ENST00000511944 ZFP37Q9Y6Q3 630 aaPredicted RBP9.26□□□□□ -0.93
NR1I3-230ENST00000511944 HELZP42694 1942 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 DENND4CQ5VZ89 1909 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 DOCK4Q8N1I0 1966 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 A0A087WUV0 522 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 MAGEB16A2A368 324 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 DCDC2BA2VCK2 349 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 KCNK1O00180 336 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 TRDMT1O14717 391 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 ATXN7O15265 892 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 KDELR3O43731 214 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 NEBLO76041 1014 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 MAP3K6O95382 1288 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 PENKP01210 267 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 EPOP01588 193 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 HOXD9P28356 352 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 MMP13P45452 471 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 RBM10P98175 930 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 TNP2Q05952 138 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 SLC20A2Q08357 652 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 ILF2Q12905 390 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 PDIA2Q13087 525 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 ZBTB17Q13105 803 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 MPP3Q13368 585 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 DMC1Q14565 340 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 GRIN2CQ14957 1233 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 COL19A1Q14993 1142 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 SLC5A9Q2M3M2 681 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 FYB2Q5VWT5 728 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 ANKRD22Q5VYY1 191 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 CXorf57Q6NSI4 855 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 RFWD3Q6PCD5 774 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 TFAP2DQ7Z6R9 452 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 ADGRD2Q7Z7M1 963 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 GPR149Q86SP6 731 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 CCDC25Q86WR0 208 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 TDRPQ86YL5 185 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 CNTD1Q8N815 330 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 TDRD5Q8NAT2 981 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 FIBINQ8TAL6 211 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 PYROXD1Q8WU10 500 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 UBLCP1Q8WVY7 318 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 ACDQ96AP0 544 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 TADA1Q96BN2 335 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 PGM2Q96G03 612 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 CELF6Q96J87 481 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 ZIM3Q96PE6 472 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 PSKH2Q96QS6 385 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 CYP2S1Q96SQ9 504 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 SEMA4AQ9H3S1 761 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 C10orf88Q9H8K7 445 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 PIDD1Q9HB75 910 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 ARNT2Q9HBZ2 717 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 SAYSD1Q9NPB0 183 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 HCFC1R1Q9NWW0 138 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 SMPD4Q9NXE4 827 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 NINJ2Q9NZG7 142 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 MRPS23Q9Y3D9 190 aaKnown RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 GPC6Q9Y625 555 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-230ENST00000511944 TEX264Q9Y6I9 313 aa9.25□□□□□ -0.93
NR1I3-230ENST00000511944 GOLGA6L7A0A1B0GV03 622 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 HMGB1P1B2RPK0 211 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 AGPSO00116 658 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 JCHAINP01591 159 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 MYZAPP0CAP1 466 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 IRF1P10914 325 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 NFKB1P19838 968 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 PSMB4P28070 264 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 ATP5DP30049 168 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 MAPK8P45983 427 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 NPY2RP49146 381 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms