RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	SETD7	Q8WTS6	366 aa	Known RBP	12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	GATA6	Q92908	595 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	IQCD	Q96DY2	449 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	EPAS1	Q99814	870 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	TRIM7	Q9C029	511 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	KLC2	Q9H0B6	622 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	CATSPERB	Q9H7T0	1116 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	AASDHPPT	Q9NRN7	309 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	DONSON	Q9NYP3	566 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	CAPN11	Q9UMQ6	739 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	FCF1	Q9Y324	198 aa	Known RBP	12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	MSRB2	Q9Y3D2	182 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	MFHAS1	Q9Y4C4	1052 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	KNTC1	P50748	2209 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081		A0A1W2PQU0	124 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	RASA4B	C9J798	803 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	FGF10	O15520	208 aa	Predicted RBP	12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	RASA4	O43374	803 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	HYAL3	O43820	417 aa	Predicted RBP	12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	MAGEC1	O60732	1142 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	CAPNS1	P04632	268 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	PROS1	P07225	676 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	FTH1P19	P0C7X4	201 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	MYBL1	P10243	752 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	SPINK2	P20155	84 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	GRK6	P43250	576 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	HCAR3	P49019	387 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	NDST2	P52849	883 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	SNRPD1	P62314	119 aa	Known RBP	12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	TPM4	P67936	248 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	ZBED6	P86452	979 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	STAT4	Q14765	748 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	PARP15	Q460N3	678 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	SLC45A4	Q5BKX6	768 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	PRAMEF14	Q5SWL7	426 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	AFMID	Q63HM1	303 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	CHCHD4	Q8N4Q1	142 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	KDF1	Q8NAX2	398 aa	Predicted RBP	12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	OR2AP1	Q8NGE2	309 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	ASB12	Q8WXK4	309 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	RAB7B	Q96AH8	199 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	PPP1R16A	Q96I34	528 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	NCAPG	Q9BPX3	1015 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	LRRC19	Q9H756	370 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	DYRK4	Q9NR20	520 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	GDF3	Q9NR23	364 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	CNOT8	Q9UFF9	292 aa	Known RBP	12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	APOBEC2	Q9Y235	224 aa	Known RBP	12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	FADS3	Q9Y5Q0	445 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	HS3ST3A1	Q9Y663	406 aa		12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	COL5A1	P20908	1838 aa	Predicted RBP	12.34	□□□□□ -0.43
CLDND1-223	ENST00000511081	ANKRD11	Q6UB99	2663 aa	Predicted RBP	12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	YKT6	O15498	198 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	TNFSF14	O43557	240 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	CREB3	O43889	395 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	RNF8	O76064	485 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	ATXN1L	P0C7T5	689 aa	Known RBP	12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	ADRB3	P13945	408 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	DES	P17661	470 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	PSMA2	P25787	234 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	MIP	P30301	263 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	MAT2A	P31153	395 aa	Known RBP	12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	HNRNPH3	P31942	346 aa	Known RBP	12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	PCK1	P35558	622 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	DNA2	P51530	1060 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	NEK3	P51956	506 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	ZNF135	P52742	658 aa	Predicted RBP	12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	CYTH1	Q15438	398 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	CA9	Q16790	459 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	ZSCAN23	Q3MJ62	389 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	ZNF805	Q5CZA5	627 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	ABI3BP	Q7Z7G0	1075 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	ZSCAN30	Q86W11	494 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	OXR1	Q8N573	874 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	FAM174A	Q8TBP5	190 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	GRIN3A	Q8TCU5	1115 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	TRIM11	Q96F44	468 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	HMCES	Q96FZ2	354 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	FEM1C	Q96JP0	617 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	BMF	Q96LC9	184 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	LENG8	Q96PV6	779 aa	Predicted RBP	12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	PEBP4	Q96S96	227 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	C1QTNF2	Q9BXJ5	285 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	CPEB1	Q9BZB8	566 aa	Known RBP	12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	TM6SF2	Q9BZW4	377 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	MRPL47	Q9HD33	250 aa	Known RBP	12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	AP4E1	Q9UPM8	1137 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	SCIN	Q9Y6U3	715 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	PLXNB3	Q9ULL4	1909 aa		12.33	□□□□□ -0.44
CLDND1-223	ENST00000511081	PTPRB	P23467	1997 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	C16orf96	A6NNT2	1141 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	AREL1	O15033	823 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	SLC31A1	O15431	190 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	TSPAN6	O43657	245 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	BUB1	O43683	1085 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	LRCH4	O75427	683 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	TMCC1	O94876	653 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	SERPING1	P05155	500 aa		12.32	□□□□□ -0.44
CLDND1-223	ENST00000511081	HNRNPA2B1	P22626	353 aa	Known RBP	12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms