RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 CLMPQ9H6B4 373 aa10.61□□□□□ -0.71
DDX41-211ENST00000510171 CHMP5Q9NZZ3 219 aa10.61□□□□□ -0.71
DDX41-211ENST00000510171 SPASTQ9UBP0 616 aa10.61□□□□□ -0.71
DDX41-211ENST00000510171 APEX2Q9UBZ4 518 aa10.61□□□□□ -0.71
DDX41-211ENST00000510171 HELZ2Q9BYK8 2649 aaKnown RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 BPTFQ12830 3046 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 PTPRQQ9UMZ3 2332 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 IGLV3-10A0A075B6K4 115 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 CDRT15L2A8MXV6 281 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 I6L893 689 aaPredicted RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 MUSKO15146 869 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 SPINT1O43278 529 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 ZMPSTE24O75844 475 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 TNFSF15O95150 251 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 MLLT3P42568 568 aaPredicted RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 CCNHP51946 323 aaPredicted RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 ADKP55263 362 aaKnown RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 PFN3P60673 137 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 APBA1Q02410 837 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 EIF2B5Q13144 721 aaKnown RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 PTK2BQ14289 1009 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 EXOC3L4Q17RC7 722 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 SLC25A52Q3SY17 297 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 PTPN20Q4JDL3 420 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 KIAA1614Q5VZ46 1190 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 CRTC1Q6UUV9 634 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 CCDC81Q6ZN84 652 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 PARS2Q7L3T8 475 aaKnown RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 PLPP6Q8IY26 295 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 MLKLQ8NB16 471 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 WDR36Q8NI36 951 aaKnown RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 WDR48Q8TAF3 677 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 NAT6Q93015 286 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 NT5C3BQ969T7 300 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 RAB7BQ96AH8 199 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 HAPLN3Q96S86 360 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 KLF6Q99612 283 aaPredicted RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.6□□□□□ -0.71
DDX41-211ENST00000510171 ATP13A1Q9HD20 1204 aa10.6□□□□□ -0.71
DDX41-211ENST00000510171 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 HECAQ9UBI9 543 aaPredicted RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 FLNBO75369 2602 aaKnown RBP10.6□□□□□ -0.71
DDX41-211ENST00000510171 C16orf96A6NNT2 1141 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 FOXN3O00409 490 aaPredicted RBP10.59□□□□□ -0.71
DDX41-211ENST00000510171 ANXA6P08133 673 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 PON1P27169 355 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 THOP1P52888 689 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 BPIFB4P59827 614 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 ARF5P84085 180 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 GNA12Q03113 381 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 CLN3Q13286 438 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 C1orf61Q13536 156 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 CAMK4Q16566 473 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 ZSCAN23Q3MJ62 389 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 ZNF805Q5CZA5 627 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 PRRT3Q5FWE3 981 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 PERM1Q5SV97 790 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 TPRG1LQ5T0D9 272 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 ESRP1Q6NXG1 681 aaKnown RBP10.59□□□□□ -0.71
DDX41-211ENST00000510171 CLEC14AQ86T13 490 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 SLC47A2Q86VL8 602 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 RYBPQ8N488 228 aaPredicted RBP10.59□□□□□ -0.71
DDX41-211ENST00000510171 TMEM35BQ8NCS4 154 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 DENND6BQ8NEG7 585 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 ISG20Q96AZ6 181 aaKnown RBP10.59□□□□□ -0.71
DDX41-211ENST00000510171 TBATAQ96M53 351 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 CCNL2Q96S94 520 aaPredicted RBP10.59□□□□□ -0.71
DDX41-211ENST00000510171 TBCBQ99426 244 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 BOCQ9BWV1 1114 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 SLC13A1Q9BZW2 595 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 ZYG11BQ9C0D3 744 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 PDCL3Q9H2J4 239 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 ZDHHC6Q9H6R6 413 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 PLCB1Q9NQ66 1216 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 APOBEC3BQ9UH17 382 aaKnown RBP10.59□□□□□ -0.71
DDX41-211ENST00000510171 PADI4Q9UM07 663 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 SHROOM3Q8TF72 1996 aa10.59□□□□□ -0.71
DDX41-211ENST00000510171 ARID1BQ8NFD5 2236 aaPredicted RBP10.58□□□□□ -0.72
DDX41-211ENST00000510171 CCDC187A0A096LP49 1063 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 GTPBP10A4D1E9 387 aaKnown RBP10.58□□□□□ -0.72
DDX41-211ENST00000510171 PMS2P1A4D2B8 440 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 LMO7DNF2Z398 122 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 PYCARD-AS1I3L0S3 204 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 YY2O15391 372 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 SLC28A2O43868 658 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 GCATO75600 419 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 WISP1O95388 367 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
DDX41-211ENST00000510171 GKP32189 559 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 CLCN1P35523 988 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 SCNN1AP37088 669 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 ETFBP38117 255 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 ABL2P42684 1182 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 YPEL5P62699 121 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 SPIDRQ14159 915 aa10.58□□□□□ -0.72
DDX41-211ENST00000510171 DRAP1Q14919 205 aaPredicted RBP10.58□□□□□ -0.72
DDX41-211ENST00000510171 POLD3Q15054 466 aaPredicted RBP10.58□□□□□ -0.72
DDX41-211ENST00000510171 ARL13BQ3SXY8 428 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms