RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 PPM1HQ9ULR3 514 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 MAGED2Q9UNF1 606 aaPredicted RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 GIT1Q9Y2X7 761 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 SHROOM3Q8TF72 1996 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 E2F8A0AVK6 867 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 MYADML2A6NDP7 307 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 ARHGAP42A6NI28 874 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 CAPN14A8MX76 684 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 I6L893 689 aaPredicted RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 TNPO2O14787 897 aaKnown RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 KPNA6O60684 536 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 LRIG2O94898 1065 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 LUC7L3O95232 432 aaKnown RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 PROCP04070 461 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 FGF3P11487 239 aaPredicted RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 NFKB1P19838 968 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 PTDSS1P48651 473 aaKnown RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 CXCR3P49682 368 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 LIMK2P53671 638 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 EPHB1P54762 984 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 HUNKP57058 714 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 SESN3P58005 492 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 GALNT2Q10471 571 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 ZBTB17Q13105 803 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 KPNB1Q14974 876 aaKnown RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 PCLAFQ15004 111 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 CCDC153Q494R4 210 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 HSF5Q4G112 596 aaPredicted RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 DNAL1Q4LDG9 190 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 ANKRD20A4Q4UJ75 823 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 KHDC1Q4VXA5 237 aaKnown RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 TIGD5Q53EQ6 642 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 PPM1JQ5JR12 505 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 TEDDM1Q5T9Z0 273 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 PPP4R4Q6NUP7 873 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 RWDD4Q6NW29 188 aaKnown RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 CXCL17Q6UXB2 119 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 REC114Q7Z4M0 266 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 C10orf107Q8IVU9 208 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.63□□□□□ -1.19
CAST-228ENST00000509903 DCLK2Q8N568 766 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 STK35Q8TDR2 534 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 SOCS4Q8WXH5 440 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 FCRL3Q96P31 734 aaPredicted RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 PGLYRP2Q96PD5 576 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 APOL2Q9BQE5 337 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 EBF4Q9BQW3 602 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 MTG1Q9BT17 334 aaPredicted RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 STN1Q9H668 368 aaKnown RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 CASS4Q9NQ75 786 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 MIOSQ9NXC5 875 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 PGPEP1Q9NXJ5 209 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 COPG2Q9UBF2 871 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 SFMBT1Q9UHJ3 866 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 SORCS3Q9UPU3 1222 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 APOBEC2Q9Y235 224 aaKnown RBP7.63□□□□□ -1.19
CAST-228ENST00000509903 SNX10Q9Y5X0 201 aa7.63□□□□□ -1.19
CAST-228ENST00000509903 MAGEB16A2A368 324 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 PRR5-ARHGAP8B1AHC4 643 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 HHLA1C9JL84 531 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 AP3B1O00203 1094 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 ITM2AO43736 263 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 DUSP11O75319 330 aaKnown RBP7.62□□□□□ -1.19
CAST-228ENST00000509903 CIB2O75838 187 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 B3GAT3O94766 335 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 GSRP00390 522 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 JCHAINP01591 159 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 AMHP03971 560 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 RALBP11234 206 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 CPA3P15088 417 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 BDNFP23560 247 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 CD68P34810 354 aaPredicted RBP7.62□□□□□ -1.19
CAST-228ENST00000509903 NPY2RP49146 381 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 COG7P83436 770 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 ARHGAP8P85298 464 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 MPP3Q13368 585 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 RCN1Q15293 331 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 PAN2Q504Q3 1202 aaKnown RBP7.62□□□□□ -1.19
CAST-228ENST00000509903 HSP90AA5PQ58FG0 334 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 ACSBG2Q5FVE4 666 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 CERCAMQ5T4B2 595 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 C6orf163Q5TEZ5 329 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 NAPEPLDQ6IQ20 393 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 FSTL4Q6MZW2 842 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 DCLRE1AQ6PJP8 1040 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 Q6ZVU0 165 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 TMEM135Q86UB9 458 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 TAC4Q86UU9 113 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 KCNMB4Q86W47 210 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 RBM15BQ8NDT2 890 aaKnown RBP7.62□□□□□ -1.19
CAST-228ENST00000509903 IRGQQ8WZA9 623 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 NAF1Q96HR8 494 aaKnown RBP7.62□□□□□ -1.19
CAST-228ENST00000509903 CELF6Q96J87 481 aaKnown RBP7.62□□□□□ -1.19
CAST-228ENST00000509903 MRGPRX2Q96LB1 330 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 GORASP1Q9BQQ3 440 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 PAAF1Q9BRP4 392 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 MLPHQ9BV36 600 aaPredicted RBP7.62□□□□□ -1.19
CAST-228ENST00000509903 TRIM62Q9BVG3 475 aa7.62□□□□□ -1.19
CAST-228ENST00000509903 SENP6Q9GZR1 1112 aaPredicted RBP7.62□□□□□ -1.19
CAST-228ENST00000509903 IL22Q9GZX6 179 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms