RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 PTK2Q05397 1052 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 CDKN3Q16667 212 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 ISXQ2M1V0 245 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 DEFB133Q30KQ1 61 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 HSP90AA4PQ58FG1 418 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 FAM102AQ5T9C2 384 aaPredicted RBP13.62□□□□□ -0.23
DDX41-210ENST00000509576 TAF3Q5VWG9 929 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 CREBRFQ8IUR6 639 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 DRC7Q8IY82 874 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 IFT43Q96FT9 208 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 ATXN7L3BQ96GX2 97 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 SPON2Q9BUD6 331 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 CLPBQ9H078 707 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 KLC2Q9H0B6 622 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 NOL6Q9H6R4 1146 aaKnown RBP13.62□□□□□ -0.23
DDX41-210ENST00000509576 SATB2Q9UPW6 733 aa13.62□□□□□ -0.23
DDX41-210ENST00000509576 GOLGA8SH3BPF8 625 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 AP1G1O43747 822 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 GP1BAP07359 652 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 MMEP08473 750 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 CHRNB2P17787 502 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 KRT9P35527 623 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 SCNN1AP37088 669 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 LSSP48449 732 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 NOMO3P69849 1222 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 LY6DQ14210 128 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 C15orf59Q2T9L4 293 aaPredicted RBP13.61□□□□□ -0.23
DDX41-210ENST00000509576 CARD16Q5EG05 197 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 ARHGAP40Q5TG30 622 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 PHLDB2Q86SQ0 1253 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 SLC35F3Q8IY50 421 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 ZNF248Q8NDW4 579 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 JOSD2Q8TAC2 188 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 SLC20A1Q8WUM9 679 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 COL26A1Q96A83 441 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 CENPTQ96BT3 561 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 C18orf8Q96DM3 657 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 VCPIP1Q96JH7 1222 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 ZNF578Q96N58 590 aaPredicted RBP13.61□□□□□ -0.23
DDX41-210ENST00000509576 PPP1R9BQ96SB3 815 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 LGMNQ99538 433 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 HEPHQ9BQS7 1158 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 ZDHHC6Q9H6R6 413 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 POLR1BQ9H9Y6 1135 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 ATP13A1Q9HD20 1204 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 MBNL1Q9NR56 388 aaKnown RBP13.61□□□□□ -0.23
DDX41-210ENST00000509576 RABGEF1Q9UJ41 708 aa13.61□□□□□ -0.23
DDX41-210ENST00000509576 C16orf96A6NNT2 1141 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 AREL1O15033 823 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 EFSO43281 561 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 PCBP4P57723 403 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 RPS21P63220 83 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 CFHR1Q03591 330 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 C1orf61Q13536 156 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 PDE1CQ14123 709 aaPredicted RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 C3orf38Q5JPI3 329 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 ATXN7L2Q5T6C5 722 aaPredicted RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 KIAA1161Q6NSJ0 714 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 EFL1Q7Z2Z2 1120 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 PARGQ86W56 976 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 ZDHHC17Q8IUH5 632 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 PCDH20Q8N6Y1 951 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 LSM14AQ8ND56 463 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 EPS8L1Q8TE68 723 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 SNRNP27Q8WVK2 155 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 CPA5Q8WXQ8 436 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 ARHGEF2Q92974 986 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 LENG8Q96PV6 779 aaPredicted RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 DEPDC7Q96QD5 511 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 HAPLN3Q96S86 360 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 LRRC61Q9BV99 259 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 BOCQ9BWV1 1114 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 ZYG11BQ9C0D3 744 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 CEP44Q9C0F1 390 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 METTL5Q9NRN9 209 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 RRN3Q9NYV6 651 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 NOCTQ9UK39 431 aaKnown RBP13.6□□□□□ -0.23
DDX41-210ENST00000509576 STAP1Q9ULZ2 295 aa13.6□□□□□ -0.23
DDX41-210ENST00000509576 EME2A4GXA9 379 aaPredicted RBP13.59□□□□□ -0.23
DDX41-210ENST00000509576 CDRT15L2A8MXV6 281 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 EPHB6O15197 1021 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 AQP9O43315 295 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 JUNDP17535 347 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 MTIF2P46199 727 aaKnown RBP13.59□□□□□ -0.23
DDX41-210ENST00000509576 KLK7P49862 253 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 DNA2P51530 1060 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 HNRNPKP61978 463 aaKnown RBP eCLIP13.59□□□□□ -0.23
DDX41-210ENST00000509576 ATP11AP98196 1134 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 PTP4A2Q12974 167 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 SRSF6Q13247 344 aaKnown RBP13.59□□□□□ -0.23
DDX41-210ENST00000509576 MTA1Q13330 715 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 MAN2A1Q16706 1144 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 DPCR1Q3MIW9 517 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 CCDC14Q49A88 953 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 KLHDC7AQ5VTJ3 777 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 NAA35Q5VZE5 725 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 ZCCHC8Q6NZY4 707 aaKnown RBP13.59□□□□□ -0.23
DDX41-210ENST00000509576 IGF2-ASQ6U949 168 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 ZNF783Q6ZMS7 281 aa13.59□□□□□ -0.23
DDX41-210ENST00000509576 SFTPA2Q8IWL1 248 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms