RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 EPS15L1Q9UBC2 864 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CD300AQ9UGN4 299 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 PHF24Q9UPV7 400 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MTO1Q9Y2Z2 717 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 HBS1LQ9Y450 684 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 A0A1W2PPW3 197 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CFAP73A6NFT4 308 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 GAKO14976 1311 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 FOXP2O15409 715 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 DLX3O60479 287 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CILPO75339 1184 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 WFS1O76024 890 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TOMM70O94826 608 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 S1PR4O95977 384 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SERPINA3P01011 423 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CKMT1AP12532 417 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF37AP17032 561 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 EPORP19235 508 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 DDCP20711 480 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CD247P20963 164 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ERVFC1P60507 584 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SPEM2Q0P670 501 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 LMAN2Q12907 356 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ADAM15Q13444 863 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CAMK1Q14012 370 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 KCNA10Q16322 511 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 C4orf17Q53FE4 359 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 IER5LQ5T953 404 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 BTBD8Q5XKL5 378 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SLC9A4Q6AI14 798 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 FIGNL1Q6PIW4 674 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TMC5Q6UXY8 1006 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SLC36A4Q6YBV0 504 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 PTCHD4Q6ZW05 846 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 KCTD8Q6ZWB6 473 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 KDM8Q8N371 416 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 BANPQ8N9N5 519 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 OR4D6Q8NGJ1 314 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 P3H4Q92791 437 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 C18orf8Q96DM3 657 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 DMRTA2Q96SC8 542 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 PIP5K1AQ99755 562 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM60Q9H2L4 133 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 OSGEPL1Q9H4B0 414 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SAV1Q9H4B6 383 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 NDUFAF4Q9P032 175 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 C19orf53Q9UNZ5 99 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MYH4Q9Y623 1939 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 MROH7-TTC4A0A0A0MT08 1334 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NPIPA5A0A0B4J1W7 369 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF785A8K8V0 405 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SNPHO15079 494 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 DCXO43602 365 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 FRAT2O75474 233 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TRUB2O95900 331 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 FUCA1P04066 466 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PROS1P07225 676 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 KCNA5P22460 613 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 MYF6P23409 242 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 MC4RP32245 332 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SNU13P55769 128 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 OXCT1P55809 520 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 STX1AQ16623 288 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 HHATQ5VTY9 493 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 KIAA1614Q5VZ46 1190 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CCDC137Q6PK04 289 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PIP4P2Q8N4L2 257 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SLC16A10Q8TF71 515 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TCF25Q9BQ70 676 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 GP6Q9HCN6 339 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 RAB9BQ9NP90 201 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 OSGEPQ9NPF4 335 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CRTAC1Q9NQ79 661 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 KCNQ5Q9NR82 932 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 IL19Q9UHD0 177 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SPO11Q9Y5K1 396 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PAPPA2Q9BXP8 1791 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 LOXHD1Q8IVV2 1947 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 M0QX08 132 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ERAL1O75616 437 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 BAG3O95817 575 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CD1AP06126 327 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 IL7RP16871 459 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TFEBP19484 476 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CD9P21926 228 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ENPP1P22413 925 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 RBL1P28749 1068 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 EPHA8P29322 1005 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 RAB28P51157 221 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 STX1BP61266 288 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 UBE2HP62256 183 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 KCNJ10P78508 379 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TNFAIP1Q13829 316 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NFYCQ13952 458 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 EZH2Q15910 746 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CST9LP1Q5W188 147 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ARMCX2Q7L311 632 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CCDC185Q8N715 623 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TC2NQ8N9U0 490 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 GOLGA5Q8TBA6 731 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms