RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 PRR20EP86478 221 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 PRR20CP86479 221 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 PRR20DP86480 221 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 PRR20BP86481 221 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 PRR20AP86496 221 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 ZFP36L1Q07352 338 aaKnown RBP9.32□□□□□ -0.92
CAST-220ENST00000508117 EDRF1Q3B7T1 1238 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 C5orf22Q49AR2 442 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 ZCWPW2Q504Y3 356 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 PRRT3Q5FWE3 981 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 SYPL2Q5VXT5 272 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 ZNF787Q6DD87 383 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 FBXL22Q6P050 247 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 GUF1Q8N442 669 aaKnown RBP9.32□□□□□ -0.92
CAST-220ENST00000508117 ARL10Q8N8L6 244 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 OR52K2Q8NGK3 314 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 FAM149B1Q96BN6 582 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 INTS4Q96HW7 963 aaKnown RBP9.32□□□□□ -0.92
CAST-220ENST00000508117 GFM1Q96RP9 751 aaKnown RBP9.32□□□□□ -0.92
CAST-220ENST00000508117 ZSWIM1Q9BR11 485 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 C2orf49Q9BVC5 232 aaPredicted RBP9.32□□□□□ -0.92
CAST-220ENST00000508117 MIS12Q9H081 205 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 APOBEC3BQ9UH17 382 aaKnown RBP9.32□□□□□ -0.92
CAST-220ENST00000508117 SERTAD1Q9UHV2 236 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 VPS28Q9UK41 221 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 PCDHB11Q9Y5F2 797 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 FADS3Q9Y5Q0 445 aa9.32□□□□□ -0.92
CAST-220ENST00000508117 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 A0A1W2PQM1 296 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 M0QYV0 167 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 PIK3R2O00459 728 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 YY2O15391 372 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 TSPAN6O43657 245 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 BNIP3LO60238 219 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 MT-CO1P00395 513 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 ADRB3P13945 408 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 WT1P19544 449 aaPredicted RBP9.31□□□□□ -0.92
CAST-220ENST00000508117 ITGB7P26010 798 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 L1CAMP32004 1257 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 NOS2P35228 1153 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 YPEL5P62699 121 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 KCNAB2Q13303 367 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 SGCGQ13326 291 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 MEA1Q16626 185 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 SKIDA1Q1XH10 827 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 TPRG1LQ5T0D9 272 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 BORAQ6PGQ7 559 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 CIR1Q86X95 450 aaPredicted RBP9.31□□□□□ -0.92
CAST-220ENST00000508117 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 RBFAQ8N0V3 343 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 FSTL5Q8N475 847 aaPredicted RBP9.31□□□□□ -0.92
CAST-220ENST00000508117 ATP11CQ8NB49 1132 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 STK32AQ8WU08 396 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 SCG3Q8WXD2 468 aaKnown RBP9.31□□□□□ -0.92
CAST-220ENST00000508117 RAB7BQ96AH8 199 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 RPRD1AQ96P16 312 aaPredicted RBP9.31□□□□□ -0.92
CAST-220ENST00000508117 LRRC61Q9BV99 259 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 SLC12A9Q9BXP2 914 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 SLC13A1Q9BZW2 595 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 POPDC2Q9HBU9 364 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 PISDQ9UG56 409 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 IL36AQ9UHA7 158 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 USP25Q9UHP3 1055 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 PCDHA7Q9UN72 937 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 LOXL2Q9Y4K0 774 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
CAST-220ENST00000508117 SDK2Q58EX2 2172 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 ZFC3H1O60293 1989 aaKnown RBP9.3□□□□□ -0.92
CAST-220ENST00000508117 ANKRD17O75179 2603 aaKnown RBP9.3□□□□□ -0.92
CAST-220ENST00000508117 PRAMEF33A0A0G2JMD5 474 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 FAM187AA6NFU0 413 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 M0QYT0 321 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 RNF103O00237 685 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 PRAMEF10O60809 474 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 LEFTY1O75610 366 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 ALPIP09923 528 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 EPB41P11171 864 aaKnown RBP9.3□□□□□ -0.92
CAST-220ENST00000508117 HGFP14210 728 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 TSHRP16473 764 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 CCR1P32246 355 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 GPD2P43304 727 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 RECQLP46063 649 aaPredicted RBP9.3□□□□□ -0.92
CAST-220ENST00000508117 CD97P48960 835 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 NUMBP49757 651 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 BLKP51451 505 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 THOP1P52888 689 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 CDH4P55283 916 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 YWHAZP63104 245 aaKnown RBP9.3□□□□□ -0.92
CAST-220ENST00000508117 CYP4F2P78329 520 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 CCL7P80098 99 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 CENPCQ03188 943 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 AUHQ13825 339 aaKnown RBP9.3□□□□□ -0.92
CAST-220ENST00000508117 ELOCQ15369 112 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 IGFBP7Q16270 282 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 CBWD6Q4V339 395 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 CBWD3Q5JTY5 395 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 CBWD5Q5RIA9 395 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 C22orf39Q6P5X5 142 aa9.3□□□□□ -0.92
CAST-220ENST00000508117 TMEM270Q6UE05 265 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms