RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 NAPEPLDQ6IQ20 393 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 FSTL4Q6MZW2 842 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CATSPERGQ6ZRH7 1159 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 DPH6Q7L8W6 267 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PID1Q7Z2X4 250 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 KRT27Q7Z3Y8 459 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMEM135Q86UB9 458 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 KCNMB4Q86W47 210 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CARM1Q86X55 608 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF354CQ86Y25 554 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ERO1BQ86YB8 467 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CAMK1DQ8IU85 385 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CHERPQ8IWX8 916 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 VWA5B2Q8N398 1253 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 GALNT4Q8N4A0 578 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 METTL25Q8N6Q8 603 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 LRRC52Q8N7C0 313 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ANKFN1Q8N957 763 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMEM102Q8N9M5 508 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 DNAAF3Q8N9W5 541 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SMYD1Q8NB12 490 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PCYOX1LQ8NBM8 494 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PLPP7Q8NBV4 271 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PDPRQ8NCN5 879 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CCNYQ8ND76 341 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PNPT1Q8TCS8 783 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC35F5Q8WV83 523 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ARNTL2Q8WYA1 636 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ABTB1Q969K4 478 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZUFSPQ96AP4 578 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ROPN1LQ96C74 230 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SGF29Q96ES7 293 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 P2RY11Q96G91 374 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CNDP2Q96KP4 475 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 HSFY1Q96LI6 401 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 AGAP3Q96P47 875 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 OR52B2Q96RD2 323 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TWNKQ96RR1 684 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC9A7Q96T83 725 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 UHRF1Q96T88 793 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TCF12Q99081 682 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PCYT2Q99447 389 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 GPR22Q99680 433 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PKP2Q99959 881 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 MRPL57Q9BQC6 102 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMEM79Q9BSE2 394 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 C11orf84Q9BUA3 381 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC25A23Q9BV35 468 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 GATA5Q9BWX5 397 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ANKRD60Q9BZ19 345 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 OSBPL6Q9BZF3 934 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SHCBP1LQ9BZQ2 653 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 MUC13Q9H3R2 512 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 RHOJQ9H4E5 214 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SMARCAD1Q9H4L7 1026 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF385DQ9H6B1 395 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PLEKHA5Q9HAU0 1116 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 MYOZ2Q9NPC6 264 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SPAG4Q9NPE6 437 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CD320Q9NPF0 282 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CASS4Q9NQ75 786 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 C20orf96Q9NUD7 363 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 DDX18Q9NVP1 670 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAIMQ9NVQ4 179 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 RHBDL2Q9NX52 303 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SYBUQ9NX95 663 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 DPP3Q9NY33 737 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 RRN3Q9NYV6 651 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ADA2Q9NZK5 511 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 NCKIPSDQ9NZQ3 722 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMEM9Q9P0T7 183 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SEPT10Q9P0V9 454 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 KLHL8Q9P2G9 620 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 HSFX1Q9UBD0 423 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SEPT3Q9UH03 358 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SARDHQ9UL12 918 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDH7Q9ULB5 785 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 FZD10Q9ULW2 581 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF510Q9Y2H8 683 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 WDR37Q9Y2I8 494 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ACOT9Q9Y305 439 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 WDR81Q562E7 1941 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TCRBV3S1A0A5B6 114 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRIM64CA6NLI5 447 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 AQP12BA6NM10 295 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 H3BSA7 217 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 WNT10BO00744 389 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 NEMP1O14524 444 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 UBDO15205 165 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 GRID2O43424 1007 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 XPOTO43592 962 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 COQ9O75208 318 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 GPC4O75487 556 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 DAB1O75553 588 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZMPSTE24O75844 475 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 BAIAP3O94812 1187 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TOP3BO95985 862 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PFKMP08237 780 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SNRPB2P08579 225 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SPATA31D3P0C874 917 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms