RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 HEATR9A2RTY3 570 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 COL6A2P12110 1019 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 SERPINB3P29508 390 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 OR1D2P34982 312 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 KCNQ1P51787 676 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 SLC14A2Q15849 920 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 TPGS2Q68CL5 300 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 KIAA0408Q6ZU52 694 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 C10orf107Q8IVU9 208 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 ARID3BQ8IVW6 561 aaPredicted RBP17.87■□□□□ 0.45
SFXN1-208ENST00000507823 NSMCE1Q8WV22 266 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 UTP4Q969X6 686 aaKnown RBP17.87■□□□□ 0.45
SFXN1-208ENST00000507823 MAGED2Q9UNF1 606 aaPredicted RBP17.87■□□□□ 0.45
SFXN1-208ENST00000507823 G3V2L1 256 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 HAUS5O94927 633 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 APOA4P06727 396 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 HMBSP08397 361 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 CPA3P15088 417 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 ALOX15P16050 662 aaPredicted RBP17.87■□□□□ 0.45
SFXN1-208ENST00000507823 CHRNA4P43681 627 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 SERPINH1P50454 418 aaKnown RBP17.87■□□□□ 0.45
SFXN1-208ENST00000507823 TLE2Q04725 743 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 TMCO4Q5TGY1 634 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 KIF2BQ8N4N8 673 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 RDH11Q8TC12 318 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 TRMT2BQ96GJ1 504 aaKnown RBP17.87■□□□□ 0.45
SFXN1-208ENST00000507823 KLHL5Q96PQ7 755 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 FAM167BQ9BTA0 163 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 WWP1Q9H0M0 922 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 ZNF358Q9NW07 568 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 SLC2A6Q9UGQ3 507 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 HAO1Q9UJM8 370 aa17.87■□□□□ 0.45
SFXN1-208ENST00000507823 F5H5T6 163 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 H3BNC9 293 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 VAPBO95292 243 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 SEC24AO95486 1093 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 SOD2P04179 222 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 KCNA4P22459 653 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 SLC1A6P48664 564 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 IRX4P78413 519 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 IKBKEQ14164 716 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 DLG2Q15700 870 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 ZCCHC23Q6ZST2 131 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 TMEM151AQ8N4L1 468 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.86■□□□□ 0.45
SFXN1-208ENST00000507823 PLD4Q96BZ4 506 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 ZNF689Q96CS4 500 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-208ENST00000507823 RAB3IPQ96QF0 476 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-208ENST00000507823 SORT1Q99523 831 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 CAB39LQ9H9S4 337 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 RC3H2Q9HBD1 1191 aaKnown RBP17.86■□□□□ 0.45
SFXN1-208ENST00000507823 MID2Q9UJV3 735 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 MROH6A6NGR9 719 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 ITM2AO43736 263 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 CBX6O95503 412 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 OR1E1P30953 314 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 SLC6A4P31645 630 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 RFC2P35250 354 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 CD86P42081 329 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 DSG1Q02413 1049 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 DSC2Q02487 901 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 LBRQ14739 615 aaKnown RBP17.86■□□□□ 0.45
SFXN1-208ENST00000507823 SNCBQ16143 134 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 CNGA3Q16281 694 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 TSTD2Q5T7W7 516 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 ZNF461Q8TAF7 563 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 PIWIL2Q8TC59 973 aaKnown RBP17.86■□□□□ 0.45
SFXN1-208ENST00000507823 PABPC5Q96DU9 382 aaKnown RBP17.86■□□□□ 0.45
SFXN1-208ENST00000507823 PPP1R12CQ9BZL4 782 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 RNF208Q9H0X6 261 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 MAGEH1Q9H213 219 aa17.86■□□□□ 0.45
SFXN1-208ENST00000507823 GOLGA8TH3BQL2 631 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ATP6V1G2O95670 118 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 EPOP01588 193 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ATXN1LP0C7T5 689 aaKnown RBP17.85■□□□□ 0.45
SFXN1-208ENST00000507823 PTPN4P29074 926 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ACVRL1P37023 503 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 IRF9Q00978 393 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 TRIM60Q495X7 471 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 HECTD3Q5T447 861 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 DEFB128Q7Z7B8 93 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 CIR1Q86X95 450 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ATXN7L3BQ96GX2 97 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 HERC2P3Q9BVR0 1158 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 FBXO6Q9NRD1 293 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-208ENST00000507823 FCHO1O14526 889 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 H2AFYO75367 372 aaKnown RBP17.85■□□□□ 0.45
SFXN1-208ENST00000507823 SLC35E2BP0CK96 405 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 RALBP11234 206 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 RPL17P18621 184 aaKnown RBP17.85■□□□□ 0.45
SFXN1-208ENST00000507823 HOXD9P28356 352 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-208ENST00000507823 GMPRP36959 345 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ATN1P54259 1190 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-208ENST00000507823 CDH4P55283 916 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ATG14Q6ZNE5 492 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 LGI2Q8N0V4 545 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 PPP1R14CQ8TAE6 165 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 PEX13Q92968 403 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 FAM96AQ9H5X1 160 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 NMRAL1Q9HBL8 299 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms