RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.71■□□□□ 0.43
RNF4-209ENST00000507784 GDAP1L1Q96MZ0 367 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 MGME1Q9BQP7 344 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 FICDQ9BVA6 458 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 TM6SF2Q9BZW4 377 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 TNKS2Q9H2K2 1166 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 EIF2B3Q9NR50 452 aaKnown RBP17.71■□□□□ 0.43
RNF4-209ENST00000507784 SLCO3A1Q9UIG8 710 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 PLA2G4CQ9UP65 541 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 SLC8A2Q9UPR5 921 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 MYO10Q9HD67 2058 aa17.71■□□□□ 0.43
RNF4-209ENST00000507784 CCDC151A5D8V7 595 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 DYNC1I1O14576 645 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 TP73O15350 636 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 INSIG1O15503 277 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 NARSO43776 548 aaKnown RBP17.7■□□□□ 0.42
RNF4-209ENST00000507784 KAT7O95251 611 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 AP2A1O95782 977 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 IGSF6O95976 241 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 SRPRAP08240 638 aaKnown RBP17.7■□□□□ 0.42
RNF4-209ENST00000507784 DLDP09622 509 aaKnown RBP17.7■□□□□ 0.42
RNF4-209ENST00000507784 CES1P23141 567 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 EIF2DP41214 584 aaKnown RBP17.7■□□□□ 0.42
RNF4-209ENST00000507784 GRIA2P42262 883 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 MAGEA6P43360 314 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 SKOR1P84550 965 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 MPP3Q13368 585 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 BBS9Q3SYG4 887 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 FNDC3BQ53EP0 1204 aaKnown RBP17.7■□□□□ 0.42
RNF4-209ENST00000507784 C22orf39Q6P5X5 142 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 PRPF39Q86UA1 669 aaKnown RBP17.7■□□□□ 0.42
RNF4-209ENST00000507784 ZCCHC9Q8N567 271 aaKnown RBP17.7■□□□□ 0.42
RNF4-209ENST00000507784 NUDCD1Q96RS6 583 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 P2RY13Q9BPV8 354 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 TBL1YQ9BQ87 522 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 APOL2Q9BQE5 337 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 LRRC40Q9H9A6 602 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 NOD2Q9HC29 1040 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 HS3ST2Q9Y278 367 aa17.7■□□□□ 0.42
RNF4-209ENST00000507784 CXorf51AA0A1B0GTR3 108 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 ERI2A8K979 691 aaKnown RBP17.69■□□□□ 0.42
RNF4-209ENST00000507784 LOC730098B7Z3J9 87 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 SPECC1L-ADORA2AF8WAN1 911 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 USP12O75317 370 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 AGTP01019 485 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 MMP2P08253 660 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 SERPINF2P08697 491 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 GRIA1P42261 906 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 WNT3AP56704 352 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 SNRPD1P62314 119 aaKnown RBP17.69■□□□□ 0.42
RNF4-209ENST00000507784 CDK16Q00536 496 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 NSUN2Q08J23 767 aaKnown RBP eCLIP17.69■□□□□ 0.42
RNF4-209ENST00000507784 MTM1Q13496 603 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 OLIG2Q13516 323 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 TDGQ13569 410 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 DGKKQ5KSL6 1271 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 FNBP1LQ5T0N5 605 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 NAPEPLDQ6IQ20 393 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 CENPUQ71F23 418 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 SFTPA1Q8IWL2 248 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 PHTF2Q8N3S3 785 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 PAF1Q8N7H5 531 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 MCUQ8NE86 351 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 OR52K1Q8NGK4 314 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 AENQ8WTP8 325 aaKnown RBP17.69■□□□□ 0.42
RNF4-209ENST00000507784 DNASE1L2Q92874 299 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 IFT43Q96FT9 208 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 MRGPRX3Q96LB0 322 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 FSD1LQ9BXM9 530 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 FOXP3Q9BZS1 431 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 TSPYL1Q9H0U9 437 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 C8orf33Q9H7E9 229 aaPredicted RBP17.69■□□□□ 0.42
RNF4-209ENST00000507784 SAYSD1Q9NPB0 183 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 TRPV5Q9NQA5 729 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 HEBP1Q9NRV9 189 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 THEGQ9P2T0 379 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 EVLQ9UI08 416 aaPredicted RBP17.69■□□□□ 0.42
RNF4-209ENST00000507784 PIAS3Q9Y6X2 628 aa17.69■□□□□ 0.42
RNF4-209ENST00000507784 TTC34A8MYJ7 566 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 H2AFXP16104 143 aaPredicted RBP17.68■□□□□ 0.42
RNF4-209ENST00000507784 RECQLP46063 649 aaPredicted RBP17.68■□□□□ 0.42
RNF4-209ENST00000507784 PFKPQ01813 784 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 DHX9Q08211 1270 aaKnown RBP17.68■□□□□ 0.42
RNF4-209ENST00000507784 PDIA2Q13087 525 aaKnown RBP17.68■□□□□ 0.42
RNF4-209ENST00000507784 EIF4HQ15056 248 aaKnown RBP17.68■□□□□ 0.42
RNF4-209ENST00000507784 HIF1AQ16665 826 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 CARD16Q5EG05 197 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 HP1BP3Q5SSJ5 553 aaPredicted RBP17.68■□□□□ 0.42
RNF4-209ENST00000507784 KCTD11Q693B1 232 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 EMBQ6PCB8 327 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 FBXO38Q6PIJ6 1188 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 NCEH1Q6PIU2 408 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 KDELC1Q6UW63 502 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 CEP128Q6ZU80 1094 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 LINC00523Q86TU6 105 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 PDIK1LQ8N165 341 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 SLC25A41Q8N5S1 370 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 PCDH20Q8N6Y1 951 aaKnown RBP17.68■□□□□ 0.42
RNF4-209ENST00000507784 DNAAF3Q8N9W5 541 aa17.68■□□□□ 0.42
RNF4-209ENST00000507784 OR6K2Q8NGY2 324 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms