RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 GLB1P16278 677 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 CD58P19256 250 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 MPSTP25325 297 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 EIF4A3P38919 411 aaKnown RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 NOP2P46087 812 aaKnown RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 TBX4P57082 545 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 OR1D5P58170 312 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 RNASE9P60153 205 aaKnown RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 PFN3P60673 137 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 ALCAMQ13740 583 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 SGSM1Q2NKQ1 1148 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 ZNF394Q53GI3 561 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 ARSIQ5FYB1 569 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 MS4A13Q5J8X5 152 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 ANKS6Q68DC2 871 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 MCTP1Q6DN14 999 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 SPOPLQ6IQ16 392 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 SPNS3Q6ZMD2 512 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 TMEM135Q86UB9 458 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 PIGZQ86VD9 579 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 FAM46DQ8NEK8 389 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 ERCC4Q92889 916 aaPredicted RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 CCDC74BQ96LY2 380 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 AK8Q96MA6 479 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 IPO9Q96P70 1041 aaKnown RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 KLF6Q99612 283 aaPredicted RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 CTRCQ99895 268 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 IRX2Q9BZI1 471 aaPredicted RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 EDEM3Q9BZQ6 932 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 VRTNQ9H8Y1 702 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 MRPL40Q9NQ50 206 aaKnown RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 PANK4Q9NVE7 773 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.36□□□□□ -1.23
VCAN-207ENST00000507162 OCIAD1Q9NX40 245 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 APPL1Q9UKG1 709 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 POLHQ9Y253 713 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 TNRC6AQ8NDV7 1962 aaKnown RBP7.36□□□□□ -1.23
VCAN-207ENST00000507162 ACANP16112 2415 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 IGHV5-10-1A0A0J9YXX1 117 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 HEATR9A2RTY3 570 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 A6NCN8 305 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 ANKUB1A6NFN9 424 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 NEMP1O14524 444 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 HGSO14964 777 aaPredicted RBP7.35□□□□□ -1.23
VCAN-207ENST00000507162 INPP4BO15327 924 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 B4GAT1O43505 415 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 SORBS2O94875 1100 aaKnown RBP7.35□□□□□ -1.23
VCAN-207ENST00000507162 VNN1O95497 513 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 CBX6O95503 412 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 CPNE6O95741 557 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 FURINP09958 794 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 VARSP26640 1264 aaKnown RBP7.35□□□□□ -1.23
VCAN-207ENST00000507162 CLCN1P35523 988 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 PPM1FP49593 454 aaPredicted RBP7.35□□□□□ -1.23
VCAN-207ENST00000507162 BLKP51451 505 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 CCL11P51671 97 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 PGDP52209 483 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 SLC8A3P57103 927 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 IRX6P78412 446 aaPredicted RBP7.35□□□□□ -1.23
VCAN-207ENST00000507162 B4GALNT1Q00973 533 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 ABHD18Q0P651 414 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 TESK1Q15569 626 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 EDRF1Q3B7T1 1238 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 ARL6IP4Q66PJ3 421 aaKnown RBP7.35□□□□□ -1.23
VCAN-207ENST00000507162 PM20D1Q6GTS8 502 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 KIAA1161Q6NSJ0 714 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 SV2BQ7L1I2 683 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 GDF7Q7Z4P5 450 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 TAF8Q7Z7C8 310 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 VPS36Q86VN1 386 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 SFTPA2Q8IWL1 248 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 AGBL5Q8NDL9 886 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 TMIEQ8NEW7 156 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 GPR156Q8NFN8 814 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 GRIN3AQ8TCU5 1115 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 DNAJC19Q96DA6 116 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 RNF31Q96EP0 1072 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 TBATAQ96M53 351 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 LENG8Q96PV6 779 aaPredicted RBP7.35□□□□□ -1.23
VCAN-207ENST00000507162 NUDT22Q9BRQ3 303 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 DDA1Q9BW61 102 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 HDAC8Q9BY41 377 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 UBXN6Q9BZV1 441 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 LRRC4Q9HBW1 653 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 LATS2Q9NRM7 1088 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 ABCC13Q9NSE7 274 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 RTTNQ86VV8 2226 aa7.35□□□□□ -1.23
VCAN-207ENST00000507162 PIPSLA2A3N6 862 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 YJEFN3A6XGL0 299 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 B4DGG1 531 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 E7ENQ6 273 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 TULP2O00295 520 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 ENDOD1O94919 500 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 PRNPP04156 253 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 DRD2P14416 443 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 PNLIPP16233 465 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 F8A1P23610 371 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 GJB2P29033 226 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 ASPAP45381 313 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 HK3P52790 923 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms