RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 UBA2Q9UBT2 640 aaPredicted RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 IL36AQ9UHA7 158 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 MBD1Q9UIS9 605 aaPredicted RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.4□□□□□ -1.22
GYPB-206ENST00000506516 ALG6Q9Y672 507 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 VPS13AQ96RL7 3174 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 CACNA1IQ9P0X4 2223 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 A0A1W2PP55 124 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 LRRC72A6NJI9 287 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 BTNL10A8MVZ5 291 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 DFFAO00273 331 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 MID1O15344 667 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 PALMO75781 387 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 RNASEH2AO75792 299 aaKnown RBP7.39□□□□□ -1.23
GYPB-206ENST00000506516 EPN2O95208 641 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 POP4O95707 220 aaKnown RBP7.39□□□□□ -1.23
GYPB-206ENST00000506516 CD160O95971 181 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 IGSF6O95976 241 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 TNNT1P13805 278 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 GNSP15586 552 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 COMTP21964 271 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 KDELR1P24390 212 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 IL4RP24394 825 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 CHRNA3P32297 505 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 PSMD8P48556 350 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 ARSEP51690 589 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 VAV2P52735 878 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 IL10RBQ08334 325 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 SPEM2Q0P670 501 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 DPYSL3Q14195 570 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 RFTN1Q14699 578 aaPredicted RBP7.39□□□□□ -1.23
GYPB-206ENST00000506516 ATP13A4Q4VNC1 1196 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 ANKRD20A8PQ5CZ79 823 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 WDR45BQ5MNZ6 344 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 TMCO4Q5TGY1 634 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 LYSMD4Q5XG99 296 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 AFMIDQ63HM1 303 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 C22orf39Q6P5X5 142 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 LEKR1Q6ZMV7 388 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 CYP2U1Q7Z449 544 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 RABEPKQ7Z6M1 372 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 DAAM2Q86T65 1068 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 FAM124AQ86V42 546 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 RGL4Q8IZJ4 473 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 BBS5Q8N3I7 341 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 RYBPQ8N488 228 aaPredicted RBP7.39□□□□□ -1.23
GYPB-206ENST00000506516 DEFB119Q8N690 84 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 CCDC112Q8NEF3 446 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 OR2AP1Q8NGE2 309 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 CEP76Q8TAP6 659 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 PIP4K2CQ8TBX8 421 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 PIGKQ92643 395 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 PPP1R16AQ96I34 528 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 LRIG1Q96JA1 1093 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 HEPHQ9BQS7 1158 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 ZNF670Q9BS34 389 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 GPR174Q9BXC1 333 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 PCED1AQ9H1Q7 454 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 TNKS2Q9H2K2 1166 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 NOL6Q9H6R4 1146 aaKnown RBP7.39□□□□□ -1.23
GYPB-206ENST00000506516 SP110Q9HB58 689 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 VPS45Q9NRW7 570 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 PPM1HQ9ULR3 514 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 FZD4Q9ULV1 537 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 PCDHGA11Q9Y5H2 935 aa7.39□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3DA0A087WVF3 549 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3IA0A087WXS9 549 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3EA0A087X179 549 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3KA0A087X1G2 549 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 BCLAF3A2AJT9 711 aaKnown RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 LRRD1A4D1F6 860 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3FA6NER0 549 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 FAM47DPA6NHR8 397 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 METTL12A8MUP2 240 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ZNF487B1APH4 448 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3LB9A6J9 549 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 J3KR12 359 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 KPNA3O00505 521 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 KHNYNO15037 678 aaKnown RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 PJA2O43164 708 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ARHGAP6O43182 974 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 SLC7A4O43246 635 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 BUB1BO60566 1050 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 PRAMEF11O60813 436 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 LILRA1O75019 489 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ZNF821O75541 412 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 LEFTY1O75610 366 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TMCC1O94876 653 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ZRANB2O95218 330 aaKnown RBP eCLIP7.38□□□□□ -1.23
GYPB-206ENST00000506516 SEMA4FO95754 770 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 GSRP00390 522 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 CD48P09326 243 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3HP0C7X1 549 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ZNF806P0C7X5 589 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ZFXP17010 805 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 MX2P20592 715 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ACSL1P33121 698 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 HOXD12P35452 270 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 MPLP40238 635 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 PTGER3P43115 390 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms