RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 EPS15L1Q9UBC2 864 aa10.55□□□□□ -0.72
TPM3-217ENST00000504663 GGA2Q9UJY4 613 aa10.55□□□□□ -0.72
TPM3-217ENST00000504663 USP15Q9Y4E8 981 aaPredicted RBP10.55□□□□□ -0.72
TPM3-217ENST00000504663 TTLL3Q9Y4R7 772 aa10.55□□□□□ -0.72
TPM3-217ENST00000504663 ZNF106Q9H2Y7 1883 aaKnown RBP10.55□□□□□ -0.72
TPM3-217ENST00000504663 TCF20Q9UGU0 1960 aaKnown RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 TYW5A2RUC4 315 aaKnown RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 K7ERQ8 282 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 CBX4O00257 560 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 SLC9A3R1O14745 358 aaPredicted RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 PRLP01236 227 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 CYBBP04839 570 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 ADH5P11766 374 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 PABPC1P11940 636 aaKnown RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 MGAT1P26572 445 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 OPRD1P41143 372 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 CD86P42081 329 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 MTHFRP42898 656 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 STK19P49842 368 aaPredicted RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 WNT3AP56704 352 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 SLC12A1Q13621 1099 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 HTR4Q13639 388 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 SLC29A2Q14542 456 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 GEN1Q17RS7 908 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 BBS9Q3SYG4 887 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 INO80DQ53TQ3 878 aaPredicted RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 HP1BP3Q5SSJ5 553 aaPredicted RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 PRPF38BQ5VTL8 546 aaKnown RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 LRIG3Q6UXM1 1119 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 RANBP10Q6VN20 620 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 PPP1R21Q6ZMI0 780 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 CENPUQ71F23 418 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 MFSD6LQ8IWD5 586 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 ZBED8Q8IZ13 594 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 FBXO36Q8NEA4 188 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 OR52K1Q8NGK4 314 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 UBLCP1Q8WVY7 318 aaPredicted RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 MYLIPQ8WY64 445 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 TTC17Q96AE7 1141 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 ELSPBP1Q96BH3 223 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 ZBTB9Q96C00 473 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 EXOC2Q96KP1 924 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 RIPOR3Q96MK2 946 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 FAM161BQ96MY7 647 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 TBL1YQ9BQ87 522 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 KXD1Q9BQD3 176 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 APOL2Q9BQE5 337 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 FERMT1Q9BQL6 677 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 TMEM109Q9BVC6 243 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 SLC2A11Q9BYW1 496 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 TSPYL1Q9H0U9 437 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 EBF3Q9H4W6 596 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 XAB2Q9HCS7 855 aaKnown RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 SYBUQ9NX95 663 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 SEPT3Q9UH03 358 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 VPS28Q9UK41 221 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 HCN2Q9UL51 889 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 CHMP2BQ9UQN3 213 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 PLAAQ9Y263 795 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 HS3ST2Q9Y278 367 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 SLC27A6Q9Y2P4 619 aa10.54□□□□□ -0.72
TPM3-217ENST00000504663 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.54□□□□□ -0.72
TPM3-217ENST00000504663 LOC285095A0A1B0GVY8 99 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ANTXRLA6NF34 631 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 H3BQ06 376 aaPredicted RBP10.53□□□□□ -0.72
TPM3-217ENST00000504663 INSIG1O15503 277 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 TULP3O75386 442 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ECI2O75521 394 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ANXA9O76027 345 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ACSL3O95573 720 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 AGTP01019 485 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 SRCP12931 536 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 TSHRP16473 764 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 CHRNA4P43681 627 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 GEMP55040 296 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 CRADDP78560 199 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 MPP3Q13368 585 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 GRM2Q14416 872 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ZNF235Q14590 738 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 EFTUD2Q15029 972 aaKnown RBP eCLIP10.53□□□□□ -0.72
TPM3-217ENST00000504663 PDGFRLQ15198 375 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 CCDC38Q502W7 563 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 TNFAIP8L3Q5GJ75 292 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ALS2CLQ60I27 953 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 CES5AQ6NT32 575 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 NCEH1Q6PIU2 408 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 MICALCLQ6ZW33 695 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 Q7L0L9 218 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ZNF354CQ86Y25 554 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 SFTPA1Q8IWL2 248 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 PDIK1LQ8N165 341 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 IPMKQ8NFU5 416 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 UHMK1Q8TAS1 419 aaKnown RBP10.53□□□□□ -0.72
TPM3-217ENST00000504663 ACDQ96AP0 544 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 NUDCD1Q96RS6 583 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 SEMA3CQ99985 751 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 FICDQ9BVA6 458 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 C2orf49Q9BVC5 232 aaPredicted RBP10.53□□□□□ -0.72
TPM3-217ENST00000504663 POLR1EQ9GZS1 481 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms