RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SUZ12Q15022 739 aaKnown RBP14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 POLD3Q15054 466 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 ASIC2Q16515 512 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 SETMARQ53H47 684 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 EFHC2Q5JST6 749 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 AFMIDQ63HM1 303 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 LRSAM1Q6UWE0 723 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 CCNI2Q6ZMN8 369 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 LEKR1Q6ZMV7 388 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 ABI3BPQ7Z7G0 1075 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 NETO2Q8NC67 525 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 OR2AP1Q8NGE2 309 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 TSC1Q92574 1164 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 HMCESQ96FZ2 354 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 KLF6Q99612 283 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 CDC6Q99741 560 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 FZD3Q9NPG1 666 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 GDF3Q9NR23 364 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 GPATCH2LQ9NWQ4 482 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 HECAQ9UBI9 543 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 GGT7Q9UJ14 662 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 ZMIZ1Q9ULJ6 1067 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 NENFQ9UMX5 172 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 PCDHB9Q9Y5E1 797 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 ANKRD36A6QL64 1941 aa14.23□□□□□ -0.13
PDLIM7-211ENST00000504318 CHD6Q8TD26 2715 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 A0A1W2PQJ5 194 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 RASA4BC9J798 803 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 AREL1O15033 823 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 RAD51BO15315 384 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 RASA4O43374 803 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 TNFSF14O43557 240 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 TMCC1O94876 653 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 FTLP02792 175 aaPredicted RBP14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 GIMD1P0DJR0 217 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 SKILP12757 684 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 NEK3P51956 506 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 YBEYP58557 167 aaPredicted RBP14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 FANCCQ00597 558 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 CAMK2BQ13554 666 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 INO80DQ53TQ3 878 aaPredicted RBP14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 ATXN7L2Q5T6C5 722 aaPredicted RBP14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 SCYL2Q6P3W7 929 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 TMPRSS7Q7RTY8 843 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 ARHGAP12Q8IWW6 846 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 OR6K2Q8NGY2 324 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 KLK6Q92876 244 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 BMFQ96LC9 184 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 KCTD15Q96SI1 283 aaPredicted RBP14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 SNRNP25Q9BV90 132 aaKnown RBP14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 PARVAQ9NVD7 372 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 LHX3Q9UBR4 397 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 APOBEC2Q9Y235 224 aaKnown RBP14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 MFHAS1Q9Y4C4 1052 aa14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 COL27A1Q8IZC6 1860 aaPredicted RBP14.22□□□□□ -0.13
PDLIM7-211ENST00000504318 APC2O95996 2303 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 TMEM8BA6NDV4 472 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 YKT6O15498 198 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 LRCH4O75427 683 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 TCF4P15884 667 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 HNRNPA2B1P22626 353 aaKnown RBP14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 IL1R2P27930 398 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 MIPP30301 263 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 HTR7P34969 479 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 GEMIN4P57678 1058 aaKnown RBP14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 CYTH1Q15438 398 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 MYLK3Q32MK0 819 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 ZNF805Q5CZA5 627 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 TPRG1LQ5T0D9 272 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 PPP1R2P3Q6NXS1 205 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 DCUN1D2Q6PH85 259 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 NPWQ8N729 165 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 OR13H1Q8NG92 308 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 PPP1R16AQ96I34 528 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 LRIG1Q96JA1 1093 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 NSMCE3Q96MG7 304 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 C1QTNF2Q9BXJ5 285 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 ZDHHC6Q9H6R6 413 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 AP4E1Q9UPM8 1137 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 ITM2BQ9Y287 266 aa14.21□□□□□ -0.13
PDLIM7-211ENST00000504318 MYLKQ15746 1914 aa14.21□□□□□ -0.14
PDLIM7-211ENST00000504318 LRP4O75096 1905 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 TSPAN11A1L157 253 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 POM121BA6NF01 834 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 ZSCAN5CA6NGD5 496 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 C16orf96A6NNT2 1141 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 SLC31A1O15431 190 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 INSIG1O15503 277 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 FGF10O15520 208 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 CREB3O43889 395 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 PSMA2P25787 234 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 RECQLP46063 649 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 ACADVLP49748 655 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 CLDN2P57739 230 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 KLHL30Q0D2K2 578 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 DPYSQ14117 519 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 STAT4Q14765 748 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 SMAD1Q15797 465 aaKnown RBP14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 PARP15Q460N3 678 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms