RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PSME3P61289 254 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 RPS7P62081 194 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 NRF1Q16656 503 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 SWT1Q5T5J6 900 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 IL27RAQ6UWB1 636 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 CYP4Z2PQ8N1L4 340 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 ZCCHC2Q9C0B9 1178 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 COL20A1Q9P218 1284 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 TMCO1Q9UM00 188 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 EFR3BQ9Y2G0 817 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 MTF2Q9Y483 593 aaPredicted RBP16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 LINC00854A0A1B0GVQ3 168 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 SPTLC1O15269 473 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 PARNO95453 639 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 MATKP42679 507 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 BCL2L1Q07817 233 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 STARD3Q14849 445 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 PCDHB18PQ96TA0 734 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 ACE2Q9BYF1 805 aaPredicted RBP16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 RERGLQ9H628 205 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 ERVK-5Q9HDB9 667 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 LRRC37A3O60309 1634 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 TRIM38O00635 465 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 RAB14P61106 215 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 DCTN2Q13561 401 aaKnown RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 C9orf57Q5W0N0 161 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 DNAJC14Q6Y2X3 702 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 BNIPLQ7Z465 357 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 ADHFE1Q8IWW8 467 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 TMEM199Q8N511 208 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 MRPL57Q9BQC6 102 aaKnown RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 C2orf49Q9BVC5 232 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 DUSP16Q9BY84 665 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 SPAG4Q9NPE6 437 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 KLHL28Q9NXS3 571 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 INVSQ9Y283 1065 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 RECQL5O94762 991 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 AIF1P55008 147 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 TUSC3Q13454 348 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 ATP1A4Q13733 1029 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 QPCTQ16769 361 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 PFKFB4Q16877 469 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 SPRYD7Q5W111 196 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 PTCD3Q96EY7 689 aaKnown RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 SEMA4BQ9NPR2 832 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 ZMYM5Q9UJ78 669 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 A0A0G2JLL6 359 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 H3BMM5 538 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 NOL4O94818 638 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 WEE1P30291 646 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 POLR2LP62875 67 aaKnown RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 ENPEPQ07075 957 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 TGM3Q08188 693 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 PDK3Q15120 406 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 USP41Q3LFD5 358 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 ARMC4Q5T2S8 1044 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 PRRT2Q7Z6L0 340 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 LPPQ93052 612 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 KREMEN1Q96MU8 473 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 FGFBP2Q9BYJ0 223 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 CHD2O14647 1828 aaKnown RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 A0A1W2PPM1 405 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 OR6C75A6NL08 312 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 TALDO1P37837 337 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 DSG4Q86SJ6 1040 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 CROCCP3Q8IVE0 287 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 NXF3Q9H4D5 531 aaKnown RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 RIBC2Q9H4K1 309 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 PNMA8CA0A1B0GUJ8 204 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 PRR23AA6NEV1 266 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 CAPZA2P47755 286 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 RAB10P61026 200 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 ARMC12Q5T9G4 340 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 C8orf59Q8N0T1 100 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 C19orf18Q8NEA5 215 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 REPS1Q96D71 796 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 FAM126AQ9BYI3 521 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 NUDT5Q9UKK9 219 aa16.32■□□□□ 0.2
HMGXB3-202ENST00000503427 PTGES3LE9PB15 166 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 KCNH1O95259 989 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 CYP2A6P11509 494 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 CCNB1P14635 433 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 CDC25CP30307 473 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 GSTT1P30711 240 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 FAM187BQ17R55 369 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 MARK2Q7KZI7 788 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 TTC7BQ86TV6 843 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 BSNDQ8WZ55 320 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 MRPL48Q96GC5 212 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 TRPC4Q9UBN4 977 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 PCDHA2Q9Y5H9 948 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 SMIM31A0A1B0GVY4 71 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 SLC9A3R1O14745 358 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 DGKAP23743 735 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 LIPMQ5VYY2 423 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 TTC23Q5W5X9 447 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 CASP12Q6UXS9 341 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms