RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 POMGNT1Q8WZA1 660 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SHC3Q92529 594 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZDHHC12Q96GR4 267 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 RPL10LQ96L21 214 aaKnown RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CRACR2AQ9BSW2 395 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 STRA6Q9BX79 667 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC46A2Q9BY10 475 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TINAGL1Q9GZM7 467 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SH2D4AQ9H788 454 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TTC12Q9H892 705 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 GPR35Q9HC97 309 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 MAGEE1Q9HCI5 957 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SPATS2LQ9NUQ6 558 aaKnown RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ANO10Q9NW15 660 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ALKBH4Q9NXW9 302 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC23A1Q9UHI7 598 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TUBE1Q9UJT0 475 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 PADI1Q9ULC6 663 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 NENFQ9UMX5 172 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 PIN4Q9Y237 131 aaKnown RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TOGARAM1Q9Y4F4 1720 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CASZ1Q86V15 1759 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 MAP2P11137 1827 aaKnown RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 A0A1W2PQM1 296 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 OR2A25A4D2G3 310 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 GAGE10A6NGK3 116 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 TEX22C9J3V5 150 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 GCOM1H8Y6P7 765 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 LDLRAD4O15165 306 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 ADAMDEC1O15204 470 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 RGS10O43665 173 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 STX6O43752 255 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 VEGFDO43915 354 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 NOL3O60936 208 aaKnown RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 LARGE1O95461 756 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 RB1P06400 928 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 ABCB1P08183 1280 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 COX7A2P14406 83 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CHN1P15882 459 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 GABRB1P18505 474 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 PI3P19957 117 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCNA2P20248 432 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CASRP41180 1078 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 MATR3P43243 847 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 GPD2P43304 727 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC15A1P46059 708 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 GZMKP49863 264 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 SH3BGRP55822 239 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM3BP58499 235 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 OLR1P78380 273 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 PRAMEP78395 509 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 ATP2C1P98194 919 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 SATB1Q01826 763 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZBTB16Q05516 673 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 TMED1Q13445 227 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 SNTB1Q13884 538 aaKnown RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 TUBB2AQ13885 445 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CSHL1Q14406 222 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CLCA4Q14CN2 919 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 MEP1BQ16820 701 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 P3H1Q32P28 736 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 PTCHD3Q3KNS1 767 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CRY2Q49AN0 593 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCDC183Q5T5S1 534 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 AFMIDQ63HM1 303 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 MCTP1Q6DN14 999 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CDC73Q6P1J9 531 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 TMEM154Q6P9G4 183 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 LINC00696Q6ZRV3 163 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 SEM1Q6ZVN7 128 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 PLEKHM3Q6ZWE6 761 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 LARP4Q71RC2 724 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 GAS2L3Q86XJ1 694 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 WDR63Q8IWG1 891 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 PLD5Q8N7P1 536 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 MIGA1Q8NAN2 632 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 SHCBP1Q8NEM2 672 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 DNERQ8NFT8 737 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 NLGN4YQ8NFZ3 816 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 RFWD2Q8NHY2 731 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 TMCO6Q96DC7 493 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 MASTLQ96GX5 879 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 AJUBAQ96IF1 538 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 LCORQ96JN0 433 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 MESP1Q9BRJ9 268 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 TUBB2BQ9BVA1 445 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCDC106Q9BWC9 280 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 SIK2Q9H0K1 926 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 HSD3B7Q9H2F3 369 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 C12orf65Q9H3J6 166 aaKnown RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 TASP1Q9H6P5 420 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 MRPL44Q9H9J2 332 aaKnown RBP4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 SCPEP1Q9HB40 452 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZBTB40Q9NUA8 1239 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 DKK3Q9UBP4 350 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 ANAPC2Q9UJX6 822 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 MKLN1Q9UL63 735 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 LIPT1Q9Y234 373 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms