RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810		A0A1W2PQJ5	194 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	RTN2	O75298	545 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	KCNK5	O95279	499 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	FTL	P02792	175 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	SERPING1	P05155	500 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	GLDC	P23378	1020 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	CD27	P26842	260 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	PRKCI	P41743	596 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	SSR1	P43307	286 aa	Known RBP	10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	SERPINH1	P50454	418 aa	Known RBP	10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ADPRH	P54922	357 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZBED6	P86452	979 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	NRG1	Q02297	640 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZNF252P-AS1	Q0IIN9	211 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	TLR1	Q15399	786 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	BNIPL	Q7Z465	357 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZNF683	Q8IZ20	524 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	PAF1	Q8N7H5	531 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	DEFB124	Q8NES8	71 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	OR2I1P	Q8NGU4	316 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	DNASE2B	Q8WZ79	361 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ALG14	Q96F25	216 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	PSMB7	Q99436	277 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ACE2	Q9BYF1	805 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	TM6SF2	Q9BZW4	377 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	DHX35	Q9H5Z1	703 aa	Known RBP	10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZDHHC6	Q9H6R6	413 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	GPAM	Q9HCL2	828 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	TMEM248	Q9NWD8	314 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	DONSON	Q9NYP3	566 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	IL36A	Q9UHA7	158 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810	SHROOM3	Q8TF72	1996 aa		10.88	□□□□□ -0.67
CDK11A-222	ENST00000498810		A0A1B0GVT2	93 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810		K7ERQ8	282 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	EEF2K	O00418	725 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	PLK4	O00444	970 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	CDX4	O14627	284 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	MCF2L	O15068	1137 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	FGF10	O15520	208 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	SLC7A4	O43246	635 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	MT-CO1	P00395	513 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	GZMA	P12544	262 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	MAT2A	P31153	395 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	L1CAM	P32004	1257 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	CHRNA3	P32297	505 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	GRIA4	P48058	902 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	CSNK1E	P49674	416 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	GALC	P54803	685 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	SLC20A2	Q08357	652 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	SCAP	Q12770	1279 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	MAMLD1	Q13495	774 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	TRIM14	Q14142	442 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	UBAP2L	Q14157	1087 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	E4F1	Q66K89	784 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	PRPF39	Q86UA1	669 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	PYROXD2	Q8N2H3	581 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	AADAT	Q8N5Z0	425 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	PCDH20	Q8N6Y1	951 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	RNF214	Q8ND24	703 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	SETD7	Q8WTS6	366 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	FRS2	Q8WU20	508 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	CENPI	Q92674	756 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	SERAC1	Q96JX3	654 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	FAM129B	Q96TA1	746 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	NCAPG	Q9BPX3	1015 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	ANP32E	Q9BTT0	268 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	XPO4	Q9C0E2	1151 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	CEP44	Q9C0F1	390 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	TTYH3	Q9C0H2	523 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	MAGEH1	Q9H213	219 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	RETREG1	Q9H6L5	497 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	GAREM1	Q9H706	876 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	TM9SF3	Q9HD45	589 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	GPATCH2L	Q9NWQ4	482 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	PCSK1N	Q9UHG2	260 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	ADAMTS1	Q9UHI8	967 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	TPX2	Q9ULW0	747 aa	Known RBP	10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	FZD10	Q9ULW2	581 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	PCDHGA11	Q9Y5H2	935 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	OR51B4	Q9Y5P0	310 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	DCHS1	Q96JQ0	3298 aa		10.87	□□□□□ -0.67
CDK11A-222	ENST00000498810	LAMA1	P25391	3075 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	TMEM229A	B2RXF0	380 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	FAM72C	H0Y354	149 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	DDX3X	O00571	662 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	BUB1	O43683	1085 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	PCDH8	O95206	1070 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	ADRB1	P08588	477 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	CSRP1	P21291	193 aa	Known RBP	10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	MSX1	P28360	303 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	ACVRL1	P37023	503 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	CCT8	P50990	548 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	RHOA	P61586	193 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	SNRPD1	P62314	119 aa	Known RBP	10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	RAD51	Q06609	339 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	CNTN1	Q12860	1018 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms