RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 RNASEH2AO75792 299 aaKnown RBP11.43□□□□□ -0.58
ERCC8-208ENST00000497892 SEMA4FO95754 770 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 GSRP00390 522 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 PRNPP04156 253 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 COMTP21964 271 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 ITPKAP23677 461 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 CHRNA3P32297 505 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 HOXD12P35452 270 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 NOP2P46087 812 aaKnown RBP11.43□□□□□ -0.58
ERCC8-208ENST00000497892 CCNHP51946 323 aaPredicted RBP11.43□□□□□ -0.58
ERCC8-208ENST00000497892 VAV2P52735 878 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 CARD16Q5EG05 197 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 SYT12Q8IV01 421 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 MAP7D3Q8IWC1 876 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 RHOT1Q8IXI2 618 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 CYP4X1Q8N118 509 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 DEFB119Q8N690 84 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 KCTD6Q8NC69 237 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 TMIEQ8NEW7 156 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 OR2AP1Q8NGE2 309 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 PCDH19Q8TAB3 1148 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 GRIN3AQ8TCU5 1115 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 GANCQ8TET4 914 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 GRPEL1Q9HAV7 217 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 SP110Q9HB58 689 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 VPS45Q9NRW7 570 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 SEMA4GQ9NTN9 838 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 UBA2Q9UBT2 640 aaPredicted RBP11.43□□□□□ -0.58
ERCC8-208ENST00000497892 IL36AQ9UHA7 158 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 SALL4Q9UJQ4 1053 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 PILRBQ9UKJ0 227 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 CACNA1EQ15878 2313 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 SHROOM3Q8TF72 1996 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 PI4KAP42356 2102 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 ATXN2Q99700 1313 aaKnown RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 LRRD1A4D1F6 860 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 METTL12A8MUP2 240 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 MEI4A8MW99 385 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 C10orf142B7Z368 130 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 KPNA3O00505 521 aaPredicted RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 PJA2O43164 708 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 PSTPIP1O43586 416 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 SPOPO43791 374 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 MFSD11O43934 449 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 FOXD2O60548 495 aaPredicted RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 AVPP01185 164 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 ZNF806P0C7X5 589 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 KDELR1P24390 212 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 DNA2P51530 1060 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 ADPRHP54922 357 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 RHOAP61586 193 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 SNRPD1P62314 119 aaKnown RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 IL10RBQ08334 325 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 CNTN1Q12860 1018 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 PAFAH1B3Q15102 231 aaKnown RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 CCDC6Q16204 474 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 ANKRD20A8PQ5CZ79 823 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 AGBL4Q5VU57 503 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 NCBP2-AS2Q69YL0 99 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 ARHGAP36Q6ZRI8 547 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 PRR23CQ6ZRP0 262 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 VSIG1Q86XK7 387 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 TP53INP2Q8IXH6 220 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 NETO2Q8NC67 525 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 TPCN2Q8NHX9 752 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 DNASE2BQ8WZ79 361 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 RAPGEF5Q92565 580 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 PIGKQ92643 395 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 VOPP1Q96AW1 172 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 LRIG1Q96JA1 1093 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 CALR3Q96L12 384 aaKnown RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 GDAP1L1Q96MZ0 367 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 HEPHQ9BQS7 1158 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 DESI2Q9BSY9 194 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 LACRTQ9GZZ8 138 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 NEUROG2Q9H2A3 272 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 GOLPH3Q9H4A6 298 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 C6orf106Q9H6K1 298 aaPredicted RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 TMEM74BQ9NUR3 256 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 HECAQ9UBI9 543 aaPredicted RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 LHX3Q9UBR4 397 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 IPO11Q9UI26 975 aaKnown RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.42□□□□□ -0.58
ERCC8-208ENST00000497892 HYOU1Q9Y4L1 999 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 SPTBN4Q9H254 2564 aa11.42□□□□□ -0.58
ERCC8-208ENST00000497892 PCDH15Q96QU1 1955 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 ANKRD36A6QL64 1941 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 LAMA1P25391 3075 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 PLXNA2O75051 1894 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 C3orf70A6NLC5 250 aaPredicted RBP11.41□□□□□ -0.58
ERCC8-208ENST00000497892 RNF103O00237 685 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 PLK4O00444 970 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 PLRG1O43660 514 aaKnown RBP11.41□□□□□ -0.58
ERCC8-208ENST00000497892 MAFKO60675 156 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 LEFTY1O75610 366 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 IGSF6O95976 241 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 KRT1P04264 644 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 ITGB7P26010 798 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms