RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 FFAR2O15552 330 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 TCEA3O75764 348 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 POP4O95707 220 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 GSRP00390 522 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 FLT3P36888 993 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 RPIAP49247 311 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 SUOXP51687 545 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 CCNHP51946 323 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 CLDN2P57739 230 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 SNRPD1P62314 119 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 YPEL5P62699 121 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 RHDQ02161 417 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 RAPGEF1Q13905 1077 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 FZD2Q14332 565 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 ZNF805Q5CZA5 627 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 KLHDC7AQ5VTJ3 777 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 TMC6Q7Z403 805 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 CASKIN2Q8WXE0 1202 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 CCDC97Q96F63 343 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 CRELD1Q96HD1 420 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 LGMNQ99538 433 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 MYOCQ99972 504 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 CLSTN2Q9H4D0 955 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 PLCB1Q9NQ66 1216 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 HECAQ9UBI9 543 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 OR12D3Q9UGF7 316 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 RAI2Q9Y5P3 530 aa17.14■□□□□ 0.33
TRAPPC3-207ENST00000497251 ERVH48-1M5A8F1 160 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 UCHL3P15374 230 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 RHOQP17081 205 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 ADRA1BP35368 520 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 DNA2P51530 1060 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 TMPRSS3P57727 454 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 ARF5P84085 180 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 RAD51Q06609 339 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 ARTNQ5T4W7 220 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 DPY19L2P1Q6NXN4 242 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 SDR16C5Q8N3Y7 309 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 ZNF548Q8NEK5 533 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 MAPK15Q8TD08 544 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 NAT6Q93015 286 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 GBP4Q96PP9 640 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 IL12RB2Q99665 862 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 NAA15Q9BXJ9 866 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 FZD3Q9NPG1 666 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 SPASTQ9UBP0 616 aa17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 AJAP1Q9UKB5 411 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-207ENST00000497251 ZNF462Q96JM2 2506 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 EME2A4GXA9 379 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 POM121BA6NF01 834 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 C16orf96A6NNT2 1141 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 NEMP1O14524 444 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 AQP9O43315 295 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 USP12O75317 370 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 CSO75390 466 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 EEF1GP26641 437 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 SDC4P31431 198 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 PFN3P60673 137 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 GABREP78334 506 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 CCDC173Q0VFZ6 552 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 FGL2Q14314 439 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 ISXQ2M1V0 245 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 MIIPQ5JXC2 388 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 MANEALQ5VSG8 457 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 TRIM72Q6ZMU5 477 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 FAM131BQ86XD5 332 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 OR2AP1Q8NGE2 309 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 SNRNP27Q8WVK2 155 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 CFAP57Q96MR6 1250 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 KLF6Q99612 283 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 TMEM248Q9NWD8 314 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 DONSONQ9NYP3 566 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 PCDHGA8Q9Y5G5 932 aa17.12■□□□□ 0.33
TRAPPC3-207ENST00000497251 MGAQ8IWI9 3026 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 LY6G6EA0A0G2JKS1 128 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 JUNDP17535 347 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 PTPN9P43378 593 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 BLKP51451 505 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 THOP1P52888 689 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 NOMO3P69849 1222 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 INO80DQ53TQ3 878 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 PARS2Q7L3T8 475 aaKnown RBP17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 IFI44Q8TCB0 444 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 HCAR2Q8TDS4 363 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 EPS8L1Q8TE68 723 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 ARHGEF2Q92974 986 aaKnown RBP17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 ZDHHC6Q9H6R6 413 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 LMBRD1Q9NUN5 540 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 PCDHB1Q9Y5F3 818 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 SNX10Q9Y5X0 201 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 FHOD1Q9Y613 1164 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 U3KQA8 63 aa17.11■□□□□ 0.33
TRAPPC3-207ENST00000497251 CFAP46Q8IYW2 2715 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 CHD5Q8TDI0 1954 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 IGLON5A6NGN9 336 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 TMEM110-MUSTN1A8MSY1 372 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 LMO7DNF2Z398 122 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 F8VZ95 297 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms