RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TBX18O95935 607 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 LMNAP02545 664 aaKnown RBP13.21□□□□□ -0.3
GARNL3-220ENST00000496711 HAPLN1P10915 354 aaPredicted RBP13.21□□□□□ -0.3
GARNL3-220ENST00000496711 COL6A2P12110 1019 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 MYL4P12829 197 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 AOC1P19801 751 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 SAT1P21673 171 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ARHGAP8P85298 464 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 SMARCB1Q12824 385 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ELAVL2Q12926 359 aaKnown RBP13.21□□□□□ -0.3
GARNL3-220ENST00000496711 CTBP1Q13363 440 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ACCSLQ4AC99 568 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ACBD5Q5T8D3 534 aaPredicted RBP13.21□□□□□ -0.3
GARNL3-220ENST00000496711 MARC1Q5VT66 337 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ZNF470Q6ECI4 717 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 FBXL22Q6P050 247 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ZYG11AQ6WRX3 759 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 KDELC2Q7Z4H8 507 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 TMPRSS6Q8IU80 811 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 SLC41A1Q8IVJ1 513 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ENDOVQ8N8Q3 282 aaKnown RBP13.21□□□□□ -0.3
GARNL3-220ENST00000496711 DBF4BQ8NFT6 615 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 NSMCE1Q8WV22 266 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 IGSF8Q969P0 613 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 PABPC5Q96DU9 382 aaKnown RBP13.21□□□□□ -0.3
GARNL3-220ENST00000496711 RANBP9Q96S59 729 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 TACO1Q9BSH4 297 aaKnown RBP13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ARNT2Q9HBZ2 717 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 ATP13A1Q9HD20 1204 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 OXSMQ9NWU1 459 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 SLC27A5Q9Y2P5 690 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 HTTP42858 3142 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 MICAL3Q7RTP6 2002 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 SLC12A8A0AV02 714 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 TK2O00142 265 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 ZNF195O14628 629 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 ENTPD5O75356 428 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 VNN2O95498 520 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 GNRH1P01148 92 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 ALDH2P05091 517 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 AVPR1AP37288 418 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 CD86P42081 329 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 CD151P48509 253 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 IDH3AP50213 366 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 PRKAA2P54646 552 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 RAB10P61026 200 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 MAXP61244 160 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 KDSRQ06136 332 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 RING1Q06587 406 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 TNK2Q07912 1038 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 ITKQ08881 620 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 SLC10A7Q0GE19 358 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 CNGA3Q16281 694 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 DNAL1Q4LDG9 190 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 RTP2Q5QGT7 225 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 RASIP1Q5U651 963 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 SLC25A41Q8N5S1 370 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 C2CD4AQ8NCU7 369 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-220ENST00000496711 TTC8Q8TAM2 541 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 C2orf15Q8WU43 125 aaKnown RBP13.2□□□□□ -0.3
GARNL3-220ENST00000496711 KCTD4Q8WVF5 259 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 KLHL5Q96PQ7 755 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 CDH19Q9H159 772 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 CRISPLD1Q9H336 500 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 CPSF2Q9P2I0 782 aaKnown RBP13.2□□□□□ -0.3
GARNL3-220ENST00000496711 HCSTQ9UBK5 93 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 NKX1-2Q9UD57 310 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-220ENST00000496711 MCM8Q9UJA3 840 aa13.2□□□□□ -0.3
GARNL3-220ENST00000496711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 DRGXA6NNA5 263 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 H7C4K7 107 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 HOXA2O43364 376 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 TBC1D4O60343 1298 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 RAMP2O60895 175 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 TRPA1O75762 1119 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 KLHL2O95198 593 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 HMBSP08397 361 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 STMN1P16949 149 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 PGM1P36871 562 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 SERPINH1P50454 418 aaKnown RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 DSC2Q02487 901 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 MTA1Q13330 715 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 GPNMBQ14956 572 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 PARP15Q460N3 678 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 CFAP157Q5JU67 520 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 LIPMQ5VYY2 423 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 LRRC8EQ6NSJ5 796 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 RSPO2Q6UXX9 243 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 KIAA0408Q6ZU52 694 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 NPAS4Q8IUM7 802 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 CENPLQ8N0S6 344 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 TEX26Q8N6G2 289 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 ZNF781Q8N8C0 355 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 SLAIN1Q8ND83 568 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 RBM15BQ8NDT2 890 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms