RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 IFI16Q16666 785 aaKnown RBP11.48□□□□□ -0.57
LRP8-211ENST00000496580 CCDC122Q5T0U0 273 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 RAP1GAP2Q684P5 730 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 GUSBP11Q6P575 273 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 ALKBH5Q6P6C2 394 aaKnown RBP11.48□□□□□ -0.57
LRP8-211ENST00000496580 GCNT7Q6ZNI0 430 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 CIR1Q86X95 450 aaPredicted RBP11.48□□□□□ -0.57
LRP8-211ENST00000496580 ACRBPQ8NEB7 543 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 FRS2Q8WU20 508 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 CALR3Q96L12 384 aaKnown RBP11.48□□□□□ -0.57
LRP8-211ENST00000496580 C16orf45Q96MC5 204 aaPredicted RBP11.48□□□□□ -0.57
LRP8-211ENST00000496580 KREMEN1Q96MU8 473 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 AGPAT1Q99943 283 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
LRP8-211ENST00000496580 ABCG4Q9H172 646 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 KDM4CQ9H3R0 1056 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 CNGB3Q9NQW8 809 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 NLGN3Q9NZ94 848 aa11.48□□□□□ -0.57
LRP8-211ENST00000496580 A0A1W2PQU0 124 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 LTFP02788 710 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 FYNP06241 537 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 GZMAP12544 262 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 KRT5P13647 590 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 CD19P15391 556 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 NUDT1P36639 197 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 CDKN3Q16667 212 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 SGO2Q562F6 1265 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 OR6B2Q6IFH4 312 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 EFL1Q7Z2Z2 1120 aaKnown RBP11.47□□□□□ -0.57
LRP8-211ENST00000496580 ZNF571Q7Z3V5 609 aaPredicted RBP11.47□□□□□ -0.57
LRP8-211ENST00000496580 LGI2Q8N0V4 545 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 SCML4Q8N228 414 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 RNF10Q8N5U6 811 aaKnown RBP11.47□□□□□ -0.57
LRP8-211ENST00000496580 DQX1Q8TE96 717 aaKnown RBP11.47□□□□□ -0.57
LRP8-211ENST00000496580 KCTD13Q8WZ19 329 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 EXTL1Q92935 676 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 AZIN2Q96A70 460 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 LZTFL1Q9NQ48 299 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 STARD5Q9NSY2 213 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 HESX1Q9UBX0 185 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 AJAP1Q9UKB5 411 aaPredicted RBP11.47□□□□□ -0.57
LRP8-211ENST00000496580 CNTN6Q9UQ52 1028 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 PCDHB4Q9Y5E5 795 aa11.47□□□□□ -0.57
LRP8-211ENST00000496580 A0A087X0T9 212 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 CPED1A4D0V7 1026 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 BTNL10A8MVZ5 291 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 RNF103O00237 685 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 O00370 1275 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 SCAMP1O15126 338 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 PJA2O43164 708 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 TNFSF15O95150 251 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 CALCAP01258 141 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 H2AFZP0C0S5 128 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 FAM228BP0C875 321 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 CYP11B1P15538 503 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 ITGB6P18564 788 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 DUSP3P51452 185 aaPredicted RBP11.46□□□□□ -0.57
LRP8-211ENST00000496580 PDX1P52945 283 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 GNG11P61952 73 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 ZNF284Q2VY69 593 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 PERM1Q5SV97 790 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 PIP5KL1Q5T9C9 394 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 PMF1Q6P1K2 205 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 TRIM72Q6ZMU5 477 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 ATG14Q6ZNE5 492 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 Q6ZVU0 165 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 H2AFVQ71UI9 128 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 CLEC14AQ86T13 490 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 TAC4Q86UU9 113 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 CHSY1Q86X52 802 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 CCDC117Q8IWD4 279 aaPredicted RBP11.46□□□□□ -0.57
LRP8-211ENST00000496580 ZNF548Q8NEK5 533 aaPredicted RBP11.46□□□□□ -0.57
LRP8-211ENST00000496580 UBE2Q2Q8WVN8 375 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 CCDC97Q96F63 343 aaPredicted RBP11.46□□□□□ -0.57
LRP8-211ENST00000496580 SLC39A13Q96H72 371 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 ALS2CR12Q96Q35 445 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 CCNL2Q96S94 520 aaPredicted RBP11.46□□□□□ -0.57
LRP8-211ENST00000496580 DDX50Q9BQ39 737 aaKnown RBP11.46□□□□□ -0.57
LRP8-211ENST00000496580 PDCL3Q9H2J4 239 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 PREBQ9HCU5 417 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 SEPT11Q9NVA2 429 aaKnown RBP11.46□□□□□ -0.57
LRP8-211ENST00000496580 DNAJC28Q9NX36 388 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 ANKMY1Q9P2S6 941 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 PPM1HQ9ULR3 514 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 ZFR2Q9UPR6 939 aaKnown RBP11.46□□□□□ -0.57
LRP8-211ENST00000496580 PCDHGA8Q9Y5G5 932 aa11.46□□□□□ -0.57
LRP8-211ENST00000496580 UTP20O75691 2785 aaKnown RBP11.46□□□□□ -0.58
LRP8-211ENST00000496580 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.45□□□□□ -0.58
LRP8-211ENST00000496580 C1QTNF3-AMACRE9PGA6 284 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 SUV39H1O43463 412 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 MED7O43513 233 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 BNIP3LO60238 219 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 CTSLP07711 333 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 FAM87AP0C7U9 286 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 SETSIPP0DME0 302 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 TACR2P21452 398 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 CASQ1P31415 396 aa11.45□□□□□ -0.58
LRP8-211ENST00000496580 CDR2Q01850 454 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms