RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 CNPY2Q9Y2B0 182 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 CLDN16Q9Y5I7 305 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 EVPLQ92817 2033 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 VWA3AA6NCI4 1184 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 ITM2AO43736 263 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 SLC25A17O43808 307 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 SOX30O94993 753 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 SERPINC1P01008 464 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 CNPP09543 421 aaKnown RBP5.98□□□□□ -1.45
SF3B1-212ENST00000496458 ARSFP54793 590 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 DSCR9P59020 149 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 KRTAP10-9P60411 292 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 TDRD12Q587J7 1177 aaKnown RBP5.98□□□□□ -1.45
SF3B1-212ENST00000496458 FBXO47Q5MNV8 452 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 PRAMEF19Q5SWL8 479 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 LDHAL6AQ6ZMR3 332 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 FAM83HQ6ZRV2 1179 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-212ENST00000496458 FJX1Q86VR8 437 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 RBFAQ8N0V3 343 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 HSPH1Q92598 858 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 STAMQ92783 540 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 PYM1Q9BRP8 204 aaKnown RBP5.98□□□□□ -1.45
SF3B1-212ENST00000496458 ISCA1Q9BUE6 129 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 ENTPD7Q9NQZ7 604 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 IL36RNQ9UBH0 155 aa5.98□□□□□ -1.45
SF3B1-212ENST00000496458 KDM4EB2RXH2 506 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-212ENST00000496458 KLK10O43240 276 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 GLUD1P00367 558 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 DCTDP32321 178 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 AMTP48728 403 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 GLUD2P49448 558 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 SLC18A2Q05940 514 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 SLC12A1Q13621 1099 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 MYBPC2Q14324 1141 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 SHBQ15464 509 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 SLC18A3Q16572 532 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 NCAPH2Q6IBW4 605 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 C8orf82Q6P1X6 216 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-212ENST00000496458 GPT2Q8TD30 523 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 TWNKQ96RR1 684 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 HERPUD2Q9BSE4 406 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 MROH8Q9H579 483 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 MVB12BQ9H7P6 319 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 CD93Q9NPY3 652 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 CNTNAP2Q9UHC6 1331 aa5.97□□□□□ -1.45
SF3B1-212ENST00000496458 CLEC18AA5D8T8 446 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 IFRD1O00458 451 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-212ENST00000496458 CTPS1P17812 591 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 ITGB8P26012 769 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 KEAP1Q14145 624 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 PLCB4Q15147 1175 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 NADSYN1Q6IA69 706 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 ANKRD42Q8N9B4 389 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 USP38Q8NB14 1042 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 CLEC18CQ8NCF0 446 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 TM6SF1Q9BZW5 370 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 LMAN2LQ9H0V9 348 aa5.96□□□□□ -1.46
SF3B1-212ENST00000496458 CHRM4P08173 479 aa5.95□□□□□ -1.46
SF3B1-212ENST00000496458 FGF3P11487 239 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-212ENST00000496458 CAPSQ13938 189 aa5.95□□□□□ -1.46
SF3B1-212ENST00000496458 NFATC4Q14934 902 aa5.95□□□□□ -1.46
SF3B1-212ENST00000496458 PATL1Q86TB9 770 aaKnown RBP5.95□□□□□ -1.46
SF3B1-212ENST00000496458 CHD1LQ86WJ1 897 aa5.95□□□□□ -1.46
SF3B1-212ENST00000496458 NEXN-AS1Q8NBZ9 246 aa5.95□□□□□ -1.46
SF3B1-212ENST00000496458 SH3KBP1Q96B97 665 aa5.95□□□□□ -1.46
SF3B1-212ENST00000496458 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.95□□□□□ -1.46
SF3B1-212ENST00000496458 MSTO1Q9BUK6 570 aa5.95□□□□□ -1.46
SF3B1-212ENST00000496458 IFT80Q9P2H3 777 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-212ENST00000496458 GPR52Q9Y2T5 361 aa5.95□□□□□ -1.46
SF3B1-212ENST00000496458 IGHV4-28A0A0C4DH34 117 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 FAM90A7PA6NKC0 464 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 SH2D7A6NKC9 451 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-212ENST00000496458 FAM90A22PA8MWA6 464 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 FAM90A12PA8MX19 464 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 FAM90A23PA8MXZ1 464 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 CHL1O00533 1208 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 PDLIM4P50479 330 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 EFR3AQ14156 821 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 CTTNQ14247 550 aaKnown RBP5.94□□□□□ -1.46
SF3B1-212ENST00000496458 CAPRIN2Q6IMN6 1127 aaKnown RBP5.94□□□□□ -1.46
SF3B1-212ENST00000496458 RBM23Q86U06 439 aaKnown RBP5.94□□□□□ -1.46
SF3B1-212ENST00000496458 MON1AQ86VX9 555 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 CLIP4Q8N3C7 705 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 RAB40AQ8WXH6 277 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 CNOT9Q92600 299 aaKnown RBP5.94□□□□□ -1.46
SF3B1-212ENST00000496458 RNF183Q96D59 192 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 ZSCAN31Q96LW9 406 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-212ENST00000496458 CLSTN3Q9BQT9 956 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 REEP2Q9BRK0 252 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 CDT1Q9H211 546 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 SLC32A1Q9H598 525 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 ALKBH4Q9NXW9 302 aa5.94□□□□□ -1.46
SF3B1-212ENST00000496458 LINC01553A4QN01 128 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 ACOT8O14734 319 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 PER2O15055 1255 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 CEP104O60308 925 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 TSPAN3O60637 253 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 KCNJ13O60928 360 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 FCGR1AP12314 374 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 C21orf33P30042 268 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms