RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 HMX2A2RU54 273 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 APOC4-APOC2K7ER74 178 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 DLGAP1O14490 977 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 SOCS2O14508 198 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 SNPHO15079 494 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CA12O43570 354 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 APOC2P02655 101 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 KRT8P05787 483 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 KRT7P08729 469 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 OSBPP22059 807 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 NR4A1P22736 598 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CD40LGP29965 261 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CAPGP40121 348 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ETV3P41162 512 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 PRKAA2P54646 552 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 RAD23AP54725 363 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 MLLT10P55197 1068 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 YWHAZP63104 245 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 BST2Q10589 180 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 PGS1Q32NB8 556 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 VWA5B1Q5TIE3 1220 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 SMYD5Q6GMV2 418 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 TUBA3EQ6PEY2 450 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ABRAQ8N0Z2 381 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 GMCL1P1Q8NEA9 526 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 LPAR1Q92633 364 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 SLCO4A1Q96BD0 722 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CFAP36Q96G28 342 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 C11orf70Q9BRQ4 267 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ZBTB26Q9HCK0 441 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 PAK5Q9P286 719 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 VTI1BQ9UEU0 232 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 KCNN3Q9UGI6 736 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 PACSIN3Q9UKS6 424 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 AGO2Q9UKV8 859 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 CNOT6Q9ULM6 557 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 THSD7BQ9C0I4 1608 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 A0A1W2PQ67 120 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 HEATR9A2RTY3 570 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 C3orf70A6NLC5 250 aaPredicted RBP9.17□□□□□ -0.94
HPS4-217ENST00000496385 KPNA7A9QM74 516 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 MAN1A2O60476 641 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 UGT2B11O75310 529 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 GABBR2O75899 941 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 CSPG5O95196 566 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 CALB1P05937 261 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 GSTM2P28161 218 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 CCND2P30279 289 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 GRIA3P42263 894 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 DPP6P42658 865 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 FCHO2Q0JRZ9 810 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 GALNT1Q10472 559 aaPredicted RBP9.17□□□□□ -0.94
HPS4-217ENST00000496385 BMPR2Q13873 1038 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 MAPRE2Q15555 327 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 SLC9B1Q4ZJI4 515 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 MROH9Q5TGP6 573 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 DHRSXQ8N5I4 330 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 SNX19Q92543 992 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 USP13Q92995 863 aaPredicted RBP9.17□□□□□ -0.94
HPS4-217ENST00000496385 SLC45A3Q96JT2 553 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 CEP295NLQ96MC4 621 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 PARK7Q99497 189 aaKnown RBP9.17□□□□□ -0.94
HPS4-217ENST00000496385 SH2D3AQ9BRG2 576 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 SNX25Q9H3E2 840 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.17□□□□□ -0.94
HPS4-217ENST00000496385 MTRRQ9UBK8 725 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 SAGE2PA6NJ88 616 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 H0YAE9 185 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 TRIM24O15164 1050 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 HDAC3O15379 428 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 ABCB7O75027 752 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 HSPA4LO95757 839 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 CYP3A4P08684 503 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 CSH1P0DML2 217 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 CSH2P0DML3 217 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 GRK3P35626 688 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 SREBF1P36956 1147 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 VASPP50552 380 aaPredicted RBP9.17□□□□□ -0.94
HPS4-217ENST00000496385 PSME3P61289 254 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 IFITM3Q01628 133 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 STX5Q13190 355 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 IDO2Q6ZQW0 420 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 USP51Q70EK9 711 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 SPRED1Q7Z699 444 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 LINC00523Q86TU6 105 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 SLC22A16Q86VW1 577 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 C10orf107Q8IVU9 208 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 UNC45BQ8IWX7 931 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 GIPC2Q8TF65 315 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 DPF3Q92784 378 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 PPWD1Q96BP3 646 aaKnown RBP9.17□□□□□ -0.94
HPS4-217ENST00000496385 CDK5RAP1Q96SZ6 601 aaKnown RBP9.17□□□□□ -0.94
HPS4-217ENST00000496385 SLA2Q9H6Q3 261 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 RUBCNLQ9H714 662 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 PCDH12Q9NPG4 1184 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 CCDC177Q9NQR7 707 aaPredicted RBP9.17□□□□□ -0.94
HPS4-217ENST00000496385 RBPJLQ9UBG7 517 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 MID2Q9UJV3 735 aa9.17□□□□□ -0.94
HPS4-217ENST00000496385 C16orf96A6NNT2 1141 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 CDK2AP1O14519 115 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms