RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 RPS21P63220 83 aaKnown RBP12.87□□□□□ -0.35
SKA1-205ENST00000494518 NOMO3P69849 1222 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 TLE3Q04726 772 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
SKA1-205ENST00000494518 CDKN3Q16667 212 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 C15orf59Q2T9L4 293 aaPredicted RBP12.87□□□□□ -0.35
SKA1-205ENST00000494518 DEFB133Q30KQ1 61 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 KLHDC7AQ5VTJ3 777 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 CDCP2Q5VXM1 449 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 KIAA1161Q6NSJ0 714 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 RWDD4Q6NW29 188 aaKnown RBP12.87□□□□□ -0.35
SKA1-205ENST00000494518 KYAT3Q6YP21 454 aaKnown RBP12.87□□□□□ -0.35
SKA1-205ENST00000494518 FAM114A1Q8IWE2 563 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 PCDH20Q8N6Y1 951 aaKnown RBP12.87□□□□□ -0.35
SKA1-205ENST00000494518 MLKLQ8NB16 471 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 ZNF548Q8NEK5 533 aaPredicted RBP12.87□□□□□ -0.35
SKA1-205ENST00000494518 IFI44Q8TCB0 444 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 MAPK15Q8TD08 544 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 C1orf74Q96LT6 269 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 NLGN3Q9NZ94 848 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 IPO11Q9UI26 975 aaKnown RBP12.87□□□□□ -0.35
SKA1-205ENST00000494518 DNAI1Q9UI46 699 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 KLF15Q9UIH9 416 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 TMEM59LQ9UK28 342 aa12.87□□□□□ -0.35
SKA1-205ENST00000494518 UNC13CQ8NB66 2214 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 CPED1A4D0V7 1026 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 NEMP1O14524 444 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 SCAMP1O15126 338 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 CASC3O15234 703 aaKnown RBP12.86□□□□□ -0.35
SKA1-205ENST00000494518 ATXN7O15265 892 aaPredicted RBP12.86□□□□□ -0.35
SKA1-205ENST00000494518 SPINT1O43278 529 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 CD160O95971 181 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 SCNN1AP37088 669 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 KLK7P49862 253 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
SKA1-205ENST00000494518 C19orf57Q0VDD7 668 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 TCEA2Q15560 299 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 ATXN7L2Q5T6C5 722 aaPredicted RBP12.86□□□□□ -0.35
SKA1-205ENST00000494518 FAM72AQ5TYM5 149 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 FAM72DQ6L9T8 149 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 GUSBP11Q6P575 273 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 EFL1Q7Z2Z2 1120 aaKnown RBP12.86□□□□□ -0.35
SKA1-205ENST00000494518 GPR155Q7Z3F1 870 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 FAM72BQ86X60 149 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 RBFAQ8N0V3 343 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 LMX1AQ8TE12 382 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 FEM1CQ96JP0 617 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 DEPDC7Q96QD5 511 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 HAPLN3Q96S86 360 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.86□□□□□ -0.35
SKA1-205ENST00000494518 CEP44Q9C0F1 390 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 ABCG4Q9H172 646 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 TCEAL2Q9H3H9 227 aaPredicted RBP12.86□□□□□ -0.35
SKA1-205ENST00000494518 SAMSN1Q9NSI8 373 aaKnown RBP12.86□□□□□ -0.35
SKA1-205ENST00000494518 TAB2Q9NYJ8 693 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 HS3ST3A1Q9Y663 406 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 AHCTF1Q8WYP5 2266 aa12.86□□□□□ -0.35
SKA1-205ENST00000494518 TENM4Q6N022 2769 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 NEMP2A6NFY4 417 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 C16orf96A6NNT2 1141 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 F8VZ95 297 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 KRIT1O00522 736 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 FPGTO14772 594 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 GFPT2O94808 682 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 UGT2B4P06133 528 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 UCHL3P15374 230 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 JUNDP17535 347 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 ITIH2P19823 946 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 TGM2P21980 687 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 PCBP4P57723 403 aaKnown RBP12.85□□□□□ -0.35
SKA1-205ENST00000494518 SGCGQ13326 291 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 C1orf61Q13536 156 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 C3orf38Q5JPI3 329 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 ZNF783Q6ZMS7 281 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 BNIPLQ7Z465 357 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 PARGQ86W56 976 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 ZNF354CQ86Y25 554 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 CACTIN-AS1Q8N1I8 211 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 MSANTD4Q8NCY6 345 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 JOSD2Q8TAC2 188 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 EPS8L1Q8TE68 723 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 RXFP2Q8WXD0 754 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 KLHL32Q96NJ5 620 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 KLF6Q99612 283 aaPredicted RBP12.85□□□□□ -0.35
SKA1-205ENST00000494518 C11orf70Q9BRQ4 267 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 NAA15Q9BXJ9 866 aaKnown RBP12.85□□□□□ -0.35
SKA1-205ENST00000494518 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 CPNE5Q9HCH3 593 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 GPR27Q9NS67 375 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 LRP4O75096 1905 aa12.85□□□□□ -0.35
SKA1-205ENST00000494518 SPTY2D1-AS1A0A0U1RR47 76 aa12.84□□□□□ -0.35
SKA1-205ENST00000494518 PMS2P1A4D2B8 440 aa12.84□□□□□ -0.35
SKA1-205ENST00000494518 H3BM21 787 aa12.84□□□□□ -0.35
SKA1-205ENST00000494518 AQP9O43315 295 aa12.84□□□□□ -0.35
SKA1-205ENST00000494518 LSM8O95777 96 aaKnown RBP12.84□□□□□ -0.35
SKA1-205ENST00000494518 CSF2P04141 144 aa12.84□□□□□ -0.35
SKA1-205ENST00000494518 NME1P15531 152 aaKnown RBP12.84□□□□□ -0.35
SKA1-205ENST00000494518 RABIFP47224 123 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms